New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4268632	32 (0.760)	3 (0.070)	3/246	NT	9.0%	coding (669/1341 nt)	PP_3740	MFS transporter
	?	NC_002947	= 4268681	30 (0.750)					coding (620/1341 nt)	PP_3740	MFS transporter

AGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATC  >  NC_002947/4268493‑4268780                                                                                                                                             |                                                                                                                                                      aGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAgg                                                                                                                                              >  5:21655/1‑149 (MQ=255)               cccAGGAAGAACAGCAACCAGAGCACCAGCGTGGTGCGGCGCATGGCCGGAGCCCGCAGCTGCCTGACCCCGGTTTTGGCACCCGCTGCCCTTGCGGCACCAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCg                                                                                                                                >  2:158423/2‑149 (MQ=255)                      agaaCCGCACCCCGCTCACCAGCGTGGTGCGGCGCAGGGCCGGCGCCAGCAGCTGCCTGACCCCGGTGTTGGCCCCCGCTGCCCTTGCGGCCACAGCCGGTAGTTGCGCC‑AATGCCGGCGGGCCACGGCGCACGGCCAGGCGGTTGAcc                                                                                                                         <  1:158423/149‑1 (MQ=255)                         aCAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCgg                                                                                                                      >  1:257353/1‑149 (MQ=255)                           aGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGc                                                                                                                    <  2:130674/149‑1 (MQ=255)                                  aGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTATTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTCCGCC‑AATGCCGGCcggccaatgctctggcccgggtcaaccgcctggccgtgcgcc                                                                                                             >  7:169807‑M1/1‑107 (MQ=255)                                        ccAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCAAGGCGGTTGACCCGGGCCAGAGCATTggcc                                                                                                       >  6:110616/1‑149 (MQ=255)                                          agggtggtgcggCGCATGGCCGGCGGCAGCAGCTGCCTGATCCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCcggccaatgctctggcccgggtcaaccggctggccgtgcgccttggccag                                                                                                     <  8:169807‑M1/146‑51 (MQ=255)                                           gCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGgc                                                                                                    >  1:149378‑M2/1‑147 (MQ=255)                                                 tgCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGt                                                                                              <  2:143355/149‑1 (MQ=255)                                                   cggcgCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGc                                                                                            >  3:90700/1‑149 (MQ=255)                                                       gcATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGGGTCAACAGCGGGTAGTTGCGCC‑ATTGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCcagc                                                                                        <  6:163751/149‑1 (MQ=255)                                                       gcATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCcagc                                                                                        <  4:90700/149‑1 (MQ=255)                                                            gCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGaaa                                                                                   <  1:122969/149‑1 (MQ=255)                                                             ccGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCagag                                                                                                               <  7:35382/120‑1 (MQ=255)                                                             ccGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCagag                                                                                                               >  8:35382/1‑120 (MQ=255)                                                                 cgcCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCa                                                                              <  1:9865/149‑1 (MQ=255)                                                                   ccAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCcggccaatgctctggcccgggtcaaccgcctggccgtgcgccttggcca                                                                                                      >  6:201294‑M1/1‑74 (MQ=255)                                                                          cTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTg                                                                    <  5:110616/149‑1 (MQ=255)                                                                                  aCCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACca                                                             >  8:248819/1‑148 (MQ=255)                                                                                   cccGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCGAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACca                                                             >  1:63764/1‑148 (MQ=255)                                                                                    ccGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACcac                                                            >  5:124730/1‑147 (MQ=255)                                                                                    ccGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACcac                                                            <  6:124730/147‑1 (MQ=255)                                                                                    ccGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCAcag                                                          >  1:201511/1‑149 (MQ=255)                                                                                             gCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTgg                                                                                                         <  2:89757/94‑1 (MQ=255)                                                                                              cACCCTCTGACCTTGCAGAAACAGCCGATAGTAACGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGCCGGTTGCCCCGGGCCAGAGCAATGGCCGGCCGGCGAGCCAGCAGAAAGTGCAGCGACT‑ATGGCAACCACAGCAGTACCAGc                                                >  8:39607/1‑149 (MQ=255)                                                                                                   tctGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGa                                            >  8:224741/1‑148 (MQ=255)                                                                                                       cccTTGCGGCAACATCCGGTAGTTGCGCC‑AATGCCGGCTTGCCAAGGCGGACGGCCAGGCGGTTGACCCGGGCCATAGCATTGGCCGGCCGGCGTGCCATGAGAAAGTCCAGCGACTCCTGGCAACCACAGCAGTACCAGCGGGATCAc                                        <  1:161073/149‑1 (MQ=255)                                                                                                       cccTTGCGGCAACAGCCGGTAGTGGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGGTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCa                                         <  8:10818/147‑1 (MQ=255)                                                                                                             cGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACg                                 >  3:215077/1‑149 (MQ=255)                                                                                                              ggCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACgg                                >  5:156956/1‑149 (MQ=255)                                                                                                                       cGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGTACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCAc                                        <  6:151786/132‑1 (MQ=255)                                                                                                                       cGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGTACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCAc                                        >  5:151786/1‑132 (MQ=255)                                                                                                                        ggTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAAGCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGAcgcc                      >  5:232331/1‑149 (MQ=255)                                                                                                                        ggTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCAAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGAcgcc                      <  2:257353/149‑1 (MQ=255)                                                                                                                                cgcC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACa              <  3:122267/149‑1 (MQ=255)                                                                                                                                           ggCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCg     >  4:224671/1‑148 (MQ=255)                                                                                                                                            gccggccaatgctctggcccgggtcaaccgcctggccgtgcgccttggccagccggcattggcgcaactaccggctgttgccgcaagggcagagggtgccaaaaccgggttcaggcagctgctggcgccggccatgcgccgcaccacgc    >  1:149378‑M1/1‑2 (MQ=255)                                                                                                                                             cTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATc  <  7:224741/149‑1 (MQ=255)                                                                                                                                             cTGGCCAAGGCGCACGGCCAGCCGGTTGACCCGGGCCAGAGCATTGGCCGgccggcattggcgcaactaccggctgttgccgcaagggcagagggtgccaaaaccgggatcaggcagctgctgccgccggccatgcgccgcaccaccct   <  8:169807‑M2/149‑100 (MQ=255)                                                                                                                                             |                                                                                                                                                      AGAAGCCGAACATGACCAGGAAGAACAGCAACCAGATCACCAGCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATC  >  NC_002947/4268493‑4268780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.