New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4268632	32 (0.760)	3 (0.070)	3/246	NT	9.0%	coding (669/1341 nt)	PP_3740	MFS transporter
	?	NC_002947	= 4268681	30 (0.750)					coding (620/1341 nt)	PP_3740	MFS transporter

GCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATCGCCAGCCCCAATGCCCCAGCAGCCATACCGCCAGCAAACCGCCAAGGG  >  NC_002947/4268535‑4268828                                                                                                                                                    |                                                                                                                                                     gCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGgc                                                                                                                                                    >  1:149378‑M2/1‑147 (MQ=255)       tgCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGt                                                                                                                                              <  2:143355/149‑1 (MQ=255)         cggcgCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGc                                                                                                                                            >  3:90700/1‑149 (MQ=255)             gcATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGGGTCAACAGCGGGTAGTTGCGCC‑ATTGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCcagc                                                                                                                                        <  6:163751/149‑1 (MQ=255)             gcATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCcagc                                                                                                                                        <  4:90700/149‑1 (MQ=255)                  gCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGaaa                                                                                                                                   <  1:122969/149‑1 (MQ=255)                       cgcCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCa                                                                                                                              <  1:9865/149‑1 (MQ=255)                                cTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTg                                                                                                                    <  5:110616/149‑1 (MQ=255)                                        aCCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACca                                                                                                             >  8:248819/1‑148 (MQ=255)                                         cccGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCCGAATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACca                                                                                                             >  1:63764/1‑148 (MQ=255)                                          ccGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACcac                                                                                                            >  5:124730/1‑147 (MQ=255)                                          ccGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACcac                                                                                                            <  6:124730/147‑1 (MQ=255)                                          ccGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCAcag                                                                                                          >  1:201511/1‑149 (MQ=255)                                                    cACCCTCTGACCTTGCAGAAACAGCCGATAGTAACGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGCCGGTTGCCCCGGGCCAGAGCAATGGCCGGCCGGCGAGCCAGCAGAAAGTGCAGCGACT‑ATGGCAACCACAGCAGTACCAGc                                                                                                >  8:39607/1‑149 (MQ=255)                                                         tctGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGa                                                                                            >  8:224741/1‑148 (MQ=255)                                                             cccTTGCGGCAACATCCGGTAGTTGCGCC‑AATGCCGGCTTGCCAAGGCGGACGGCCAGGCGGTTGACCCGGGCCATAGCATTGGCCGGCCGGCGTGCCATGAGAAAGTCCAGCGACTCCTGGCAACCACAGCAGTACCAGCGGGATCAc                                                                                        <  1:161073/149‑1 (MQ=255)                                                             cccTTGCGGCAACAGCCGGTAGTGGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGGTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCa                                                                                         <  8:10818/147‑1 (MQ=255)                                                                   cGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACg                                                                                 >  3:215077/1‑149 (MQ=255)                                                                    ggCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACgg                                                                                >  5:156956/1‑149 (MQ=255)                                                                             cGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGTACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCAc                                                                                        >  5:151786/1‑132 (MQ=255)                                                                             cGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGTACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCAc                                                                                        <  6:151786/132‑1 (MQ=255)                                                                              ggTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAAGCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGAcgcc                                                                      >  5:232331/1‑149 (MQ=255)                                                                              ggTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCAAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGAcgcc                                                                      <  2:257353/149‑1 (MQ=255)                                                                                      cgcC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACa                                                              <  3:122267/149‑1 (MQ=255)                                                                                                 ggCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCg                                                     >  4:224671/1‑148 (MQ=255)                                                                                                   cTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATc                                                  <  7:224741/149‑1 (MQ=255)                                                                                                   cTGGCCAAGGCGCACGGCCAGCCGGTTGACCCGGGCCAGAGCATTGGCCGgccggcattggcgcaactaccggctgttgccgcaagggcagagggtgccaaaaccgggatcaggcagctgctgccgccggccatgcgccgcaccaccct                                                   <  8:169807‑M2/149‑100 (MQ=255)                                                                                                    tGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGgccggcattggcgcaactaccggctgttgccgcaagggcagagggtgccaaaaccgggttcaggcagctgctgg                                                                            >  6:201294‑M2/1‑49 (MQ=255)                                                                                                      gCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATCGc                                                <  7:248819/148‑1 (MQ=255)                                                                                                           ggCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGgccggcattggcggaactaccggctgttgccgcaagggcagagggtgccaataccgggttcaggcagctgctggcgccggccatgcgccgcaccacgctggtgatct                                           >  7:169807‑M2/1‑42 (MQ=255)                                                                                                              gcACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATCGCCAGCCCCaa                                       >  3:259947/1‑149 (MQ=255)                                                                                                                   gCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATCGCCAGCCCCAATGccc                                  <  6:232331/149‑1 (MQ=255)                                                                                                                         cGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATCGCCAGCCCCAATGCCCcagcag                            <  6:21655/149‑1 (MQ=255)                                                                                                                              gACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATCGCCAGCCCCAATGCCCCAGCAGCCAt                        <  3:224671/148‑1 (MQ=255)                                                                                                                                cccGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATCGCCAGCCCCAATGCCCCAGCAGCCATAcc                     <  4:215077/149‑1 (MQ=255)                                                                                                                                    ggCCAGACCCTTGGCCGGCCGGGGGGCCATCAGAAAGTCCCTCGCCT‑CTGGCAACCACAGCAGTACCAGCGGGATCCCCAGTAAGGGGACGACGCCGCCAAACATAAATACCGCTCCCCAGCCCCAAAGCCCCAGCAGCCATACCGCCa                 <  6:156956/149‑1 (MQ=255)                                                                                                                                                 gccggccgGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATCGCCAGCCCCAATGCCCCCGCATCCATACCGCCAGCAAACCGCCacg    >  2:163296/1‑147 (MQ=255)                                                                                                                                                   cggccggcGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATCGCCAGCCCCAATGCCCCAGCAGCCATACCGCCAGCAAACCGCCAAggg  >  3:227261/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GCGTGGTGCGGCGCATGGCCGGCGCCAGCAGCTGCCTGAACCCGGTTTTGGCACCCTCTGCCCTTGCGGCAACAGCCGGTAGTTGCGCC‑AATGCCGGCTGGCCAAGGCGCACGGCCAGGCGGTTGACCCGGGCCAGAGCATTGGCCGGCCGGCGTGCCAGCAGAAAGTCCAGCGACT‑CTGGCAACCACAGCAGTACCAGCGGGATCACCAGTACGGTGACGACGCCGCCAAACAGAAATACCGATCGCCAGCCCCAATGCCCCAGCAGCCATACCGCCAGCAAACCGCCAAGGG  >  NC_002947/4268535‑4268828

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.