New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5052661 =	43 (1.020)	3 (0.070)	3/248	NT	6.4%	coding (1790/1833 nt)	gsiA	glutathione ABC transporter ATP‑binding protein
	?	NC_002947	5052687 =	47 (1.160)					coding (1764/1833 nt)	gsiA	glutathione ABC transporter ATP‑binding protein

CCCAGGTGAAGCAGTGCCGTCCCGGGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGT  >  NC_002947/5052516‑5052807                                                                                                                                                  |                                                                                                                                                   cccAGGTGAAGCAGTGCCGTCCCGGGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCgg                                                                                                                                                 >  4:100806/1‑149 (MQ=255) cccAGGTGAAGCAGAGCCGTCCCGGGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCgg                                                                                                                                                 >  4:126673/1‑149 (MQ=255)   cAGGTGAAGCAGTGCCGTCCCGGGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCt                                                                                                                                               <  5:108589/149‑1 (MQ=255)     ggTGAAGCAGTGCCGTCCCGGGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTcccc                                                                                                                                                   >  4:99980/1‑143 (MQ=255)     ggTGAAGCAGTGCCGTCCCGGGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTcccc                                                                                                                                                   <  3:99980/143‑1 (MQ=255)         aaGCAGTGCCGTCCCGGGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGa                                                                                                                                         <  3:257983/149‑1 (MQ=255)          aGCAGTGCCGTCCCGTGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCTTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGAt                                                                                                                                        <  6:142531/149‑1 (MQ=255)              gTGCCGTCCCGGGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATacac                                                                                                                                    >  3:74036/1‑149 (MQ=255)                      ccGGGTCTCAAAATAAACACCGAGAAACATCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCTGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCg                                                                                                                            <  6:250753/149‑1 (MQ=255)                        gggTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCgga                                                                                                                          <  2:135127/149‑1 (MQ=255)                             tcAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                     >  5:42745/1‑149 (MQ=255)                             tcAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                     >  4:182298/1‑149 (MQ=255)                               aaaaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                     <  5:259678/147‑1 (MQ=255)                               aaaaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                     <  6:216641/147‑1 (MQ=255)                                aaaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGa                                                                                                                   >  6:144833/1‑148 (MQ=255)                                aaaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGa                                                                                                                   >  6:41727/1‑148 (MQ=255)                                 aaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGaaa                                                                                                                 <  4:118042/149‑1 (MQ=255)                                 aaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGaaa                                                                                                                 >  6:144091/1‑149 (MQ=255)                                      acacCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATg                                                                                                            <  5:72507/149‑1 (MQ=255)                                      acacCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATg                                                                                                            <  3:182298/149‑1 (MQ=255)                                       cacCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATgc                                                                                                           >  5:65639/1‑149 (MQ=255)                                        acCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATgcg                                                                                                          >  5:41176/1‑149 (MQ=255)                                              aaaCAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTtat                                                                                                    <  3:126673/149‑1 (MQ=255)                                               aaCAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTtat                                                                                                    <  6:65639/148‑1 (MQ=255)                                                 cAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACg                                                                                                 <  1:240005/149‑1 (MQ=255)                                                   gCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGa                                                                                               <  6:42745/149‑1 (MQ=255)                                                   gCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGa                                                                                               <  3:178351/149‑1 (MQ=255)                                                    cACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAg                                                                                              >  1:184838/1‑149 (MQ=255)                                                       tGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGa                                                                                               >  4:173940/1‑145 (MQ=255)                                                       tGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGa                                                                                               <  3:173940/145‑1 (MQ=255)                                                           tttCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAg                                                                                              <  8:254451/142‑1 (MQ=255)                                                           tttCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAg                                                                                              >  7:254451/1‑142 (MQ=255)                                                           tttCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCaa                                                                                       <  5:41727/149‑1 (MQ=255)                                                             tattcctgaccctgcacgaaagcaggtgcagcgagtgtctgccggtactttgagaactccgtataaagcgcatgatttcattcctCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                     >  4:168234‑M1/86‑117 (MQ=255)                                                             tattcctgaccctgcacgaaagcaggtgcagcgagtgtctgccggtactttgagaactccgtataaagcgcatgatttcattcctCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                     <  3:168234‑M1/32‑1 (MQ=255)                                                             tCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGTCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCaaa                                                                                      <  5:144833/148‑1 (MQ=255)                                                                      gatgatGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGc                                                                              <  3:134060/147‑1 (MQ=255)                                                                             gTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTc                                                                      <  5:109168/148‑1 (MQ=255)                                                                                    cTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCAc                                                               >  2:119733/1‑148 (MQ=255)                                                                                       aaCCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCt                                                             <  4:74036/147‑1 (MQ=255)                                                                                           gCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTc                                                       <  8:202954/149‑1 (MQ=255)                                                                                             gagtggctgccggtactttgagaactccgtataaagcgcatgatttcattcctCCGGCACGGGTGTATCACCAAGCCGGAGTAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGt                                                     >  2:221744‑M1/54‑149 (MQ=255)                                                                                                 tCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAg                                                 >  4:150757/1‑149 (MQ=255)                                                                                                   aGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAgg                                                <  5:144091/148‑1 (MQ=255)                                                                                                            aCCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATa                                      <  2:184838/149‑1 (MQ=255)                                                                                                                  cGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTAc                                 <  2:184621/148‑1 (MQ=255)                                                                                                                      ttCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAg                                                 <  3:210537/128‑1 (MQ=255)                                                                                                                      ttCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAg                                                 >  4:210537/1‑128 (MQ=255)                                                                                                                            cTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGtcaatc                       >  3:243060/1‑148 (MQ=255)                                                                                                                                   tAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGc                <  6:41176/148‑1 (MQ=255)                                                                                                                                             ccTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGt                            >  6:270160/1‑126 (MQ=255)                                                                                                                                             ccTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGt                            <  5:270160/126‑1 (MQ=255)                                                                                                                                              cTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGAt    <  4:243060/149‑1 (MQ=255)                                                                                                                                                ccccGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGtcaat                        >  2:134199/1‑127 (MQ=255)                                                                                                                                                ccccGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGtcaat                        <  1:134199/127‑1 (MQ=255)                                                                                                                                                ccccGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGt  >  7:196572/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CCCAGGTGAAGCAGTGCCGTCCCGGGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGT  >  NC_002947/5052516‑5052807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.