New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5052661 =	43 (1.020)	3 (0.070)	3/248	NT	6.4%	coding (1790/1833 nt)	gsiA	glutathione ABC transporter ATP‑binding protein
	?	NC_002947	5052687 =	47 (1.160)					coding (1764/1833 nt)	gsiA	glutathione ABC transporter ATP‑binding protein

GGGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCG  >  NC_002947/5052539‑5052828                                                                                                                                                     |                                                                                                                                              gggTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCgga                                                                                                                                               <  2:135127/149‑1 (MQ=255)      tcAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                                          >  4:182298/1‑149 (MQ=255)      tcAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                                          >  5:42745/1‑149 (MQ=255)        aaaaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                                          <  5:259678/147‑1 (MQ=255)        aaaaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                                          <  6:216641/147‑1 (MQ=255)         aaaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGa                                                                                                                                        >  6:41727/1‑148 (MQ=255)         aaaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGa                                                                                                                                        >  6:144833/1‑148 (MQ=255)          aaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGaaa                                                                                                                                      >  6:144091/1‑149 (MQ=255)          aaTAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGaaa                                                                                                                                      <  4:118042/149‑1 (MQ=255)               acacCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATg                                                                                                                                 <  5:72507/149‑1 (MQ=255)               acacCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATg                                                                                                                                 <  3:182298/149‑1 (MQ=255)                cacCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATgc                                                                                                                                >  5:65639/1‑149 (MQ=255)                 acCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATgcg                                                                                                                               >  5:41176/1‑149 (MQ=255)                       aaaCAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTtat                                                                                                                         <  3:126673/149‑1 (MQ=255)                        aaCAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTtat                                                                                                                         <  6:65639/148‑1 (MQ=255)                          cAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACg                                                                                                                      <  1:240005/149‑1 (MQ=255)                            gCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGa                                                                                                                    <  6:42745/149‑1 (MQ=255)                            gCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGa                                                                                                                    <  3:178351/149‑1 (MQ=255)                             cACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAg                                                                                                                   >  1:184838/1‑149 (MQ=255)                                tGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGa                                                                                                                    >  4:173940/1‑145 (MQ=255)                                tGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGa                                                                                                                    <  3:173940/145‑1 (MQ=255)                                    tttCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAg                                                                                                                   >  7:254451/1‑142 (MQ=255)                                    tttCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAg                                                                                                                   <  8:254451/142‑1 (MQ=255)                                    tttCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCaa                                                                                                            <  5:41727/149‑1 (MQ=255)                                      tattcctgaccctgcacgaaagcaggtgcagcgagtgtctgccggtactttgagaactccgtataaagcgcatgatttcattcctCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                                          >  4:168234‑M1/86‑117 (MQ=255)                                      tattcctgaccctgcacgaaagcaggtgcagcgagtgtctgccggtactttgagaactccgtataaagcgcatgatttcattcctCCGGCTTGGTGATACACCCGTGCCGGAGGAAt                                                                                                                                          <  3:168234‑M1/32‑1 (MQ=255)                                      tCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGTCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCaaa                                                                                                           <  5:144833/148‑1 (MQ=255)                                               gatgatGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGc                                                                                                   <  3:134060/147‑1 (MQ=255)                                                     acgaaagcaggtgcagcgagtgtctgccggtactttgagaactccgtataaagcgcatgatttcattactccggcttggtgatacacccgtgccggAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGCCACTc                                                                                           >  2:221744‑M2/97‑149 (MQ=255)                                                      gTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTc                                                                                           <  5:109168/148‑1 (MQ=255)                                                             cTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCAc                                                                                    >  2:119733/1‑148 (MQ=255)                                                                aaCCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCt                                                                                  <  4:74036/147‑1 (MQ=255)                                                                    gCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTc                                                                            <  8:202954/149‑1 (MQ=255)                                                                      gagtggctgccggtactttgagaactccgtataaagcgcatgatttcattcctCCGGCACGGGTGTATCACCAAGCCGGAGTAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGt                                                                          >  2:221744‑M1/54‑149 (MQ=255)                                                                          tCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAg                                                                      >  4:150757/1‑149 (MQ=255)                                                                            aGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAgg                                                                     <  5:144091/148‑1 (MQ=255)                                                                                     aCCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATa                                                           <  2:184838/149‑1 (MQ=255)                                                                                           cGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTAc                                                      <  2:184621/148‑1 (MQ=255)                                                                                               ttCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAg                                                                      <  3:210537/128‑1 (MQ=255)                                                                                               ttCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAg                                                                      >  4:210537/1‑128 (MQ=255)                                                                                                     cTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGtcaatc                                            >  3:243060/1‑148 (MQ=255)                                                                                                            tAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGc                                     <  6:41176/148‑1 (MQ=255)                                                                                                                     attcctccggcacgggtgtatcaccaagccggAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATa                                                           <  3:168234‑M2/85‑1 (MQ=255)                                                                                                                     attcctccggcacgggtgtatcaccaagccggAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATa                                                           >  4:168234‑M2/33‑117 (MQ=255)                                                                                                                      ccTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGt                                                 <  5:270160/126‑1 (MQ=255)                                                                                                                      ccTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGt                                                 >  6:270160/1‑126 (MQ=255)                                                                                                                       cTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGAt                         <  4:243060/149‑1 (MQ=255)                                                                                                                         ccccGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGtcaat                                             >  2:134199/1‑127 (MQ=255)                                                                                                                         ccccGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGtcaat                                             <  1:134199/127‑1 (MQ=255)                                                                                                                         ccccGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGt                       >  7:196572/1‑149 (MQ=255)                                                                                                                                      aTACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTa           >  4:260923/1‑148 (MQ=255)                                                                                                                                       tACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTaaa         <  1:119733/149‑1 (MQ=255)                                                                                                                                       tACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTaaa         <  3:150757/149‑1 (MQ=255)                                                                                                                                          acCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGAt      >  6:18959/1‑149 (MQ=255)                                                                                                                                           cccGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGAtt     >  8:198339/1‑149 (MQ=255)                                                                                                                                              gTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCg  <  8:196572/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                              GGGTCTCAAAATAAACACCGAGAAACAGCACTGCATTTCGTTACTTGATGATGGTAAGACCTGAACCGCTAGCTCAGACTCAGCACCATTCGCCTTCGGGCTCCATGTAAAAGTGACCCTCCCCGGCTTGGTGATACACCCGTGCCGGAGGAATGAAATCATGCGCTTTATACGGAGTTCTCAAAGTACCGGCAGACACTCGCTGCACCTGCTTTCGTGCAGGGTCAGGAATAGGTACTGCGTCAATCAAACGGCGTGTATAGGGATGTTTAGGATCGTTAAAGATTGCG  >  NC_002947/5052539‑5052828

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.