| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5914184 | 22 (0.520) | 4 (0.120) | 4/202 | NT | 16.3% | intergenic (+76/+77) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | = 5914224 | 24 (0.730) | intergenic (+116/+37) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
GGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCT‑CGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCG > NC_002947/5914036‑5914332 | ggAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCCCGCCCGCTCCC > 8:103481‑M1/1‑149 (MQ=255) gAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTc > 1:170949/1‑149 (MQ=255) ttCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGaa < 1:192792/146‑1 (MQ=255) ttCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGaa > 2:192792/1‑146 (MQ=255) cACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagcct > 6:62866‑M1/1‑124 (MQ=255) ccGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTa > 6:250841/1‑149 (MQ=255) cAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgg < 5:62866‑M1/149‑49 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCCCGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGGGACGTACCGGTgggagcggg < 4:54506‑M2/149‑10 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGaa < 4:99986/116‑1 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGaa > 3:99986/1‑116 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa > 5:162918/1‑131 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa < 6:162918/131‑1 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcggg > 8:156205‑M2/1‑140 (MQ=255) aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTAGCGGGCACGCCCGCGCCCGCCGGGGAATTTAGAAGGCTGAAGCCTGTGACTTACCGGTgggcgcggg < 8:21095‑M2/149‑10 (MQ=255) ccGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCCCGCCCGCGGCCGGCGGGGTATTTGGAAGGGTGAAGGCGGTGGCGTTCCGGTGGGGGCGGGCGTGGCCGCGGAGCgg > 3:225858/1‑149 (MQ=255) cGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCCACGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagaggg > 7:103481‑M2/1‑123 (MQ=255) gaaaaCGAAACCGCCGCCCCTCACGGGCGGCGTTTTTGTTTGAGACCGGGGTCGCCCTCTGCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGACGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGggcgg < 3:54506/147‑1 (MQ=39) aaaCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGaa > 8:117468/1‑88 (MQ=255) aaaCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGaa < 7:117468/88‑1 (MQ=255) aCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgc < 5:122363‑M1/110‑41 (MQ=255) aCGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgc > 6:122363‑M1/1‑70 (MQ=255) gccgccCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGaa < 3:157320/84‑1 (MQ=255) gccgccCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGaa > 4:157320/1‑84 (MQ=255) gTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCGGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGGTTACAGGGGCTTCT‑CGAAAATCtt > 1:13780/1‑149 (MQ=255) gTTTTTGTTTGAGACCGGTGTCGCCCTCTTCCCGGGCACCCCCCCTACCCCAGCGGAATTTCCAAGGCATAAGCCAGTGACATACCTGTGGGACCGCGCCTGCCCGCCAAGAGGGCGGCCCAGGGGTACCGGGGCTTCT‑CCaaaaaat > 2:44077/1‑145 (MQ=255) ttttGTTTGAGACGGGTGTCGCCCTCTGCGCGGCCCCCCCCGCCCCCCCTGGTAAATTCCTACGGCTGACGCCTGTTACTTCCCTGGGGGCGGGGGGGTGCCCGCTAAGAGGGCGGCCCAGGCTTACAGGGGCTTCT‑CGAAAATCTTc < 2:170949/148‑1 (MQ=255) ccGCCCTCTGCGCGGCCACGCCCGCTCCCGCTGGTTAATTGCCACGGCTCACGCCTGTTACTTACGGGTGGGAGCGGGCGGGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCT‑CGAAAATCTTCGAATTGCGCTGGTAGTTGt < 7:21095/148‑1 (MQ=255) cccTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccgtggaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacg > 7:103481‑M1/1‑26 (MQ=255) cccTCTTCGCGGGCACGCCCGCTCCCGCAGGTTAATTTCTAAGGCTGACGCCTGTTACTTACCTGGGGCAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCT‑CGAAAATCTTCGAATTGCGCTGGTAGTTGTACa < 2:13780/149‑1 (MQ=255) tCGCGGGCAGGCCCGCTCCCGCAGGGTATTTTCGAAGGCTGATGCTTGTGACTTACCTGGGGGAGGGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGa < 1:44077/148‑1 (MQ=255) cgGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCT‑CGAAAATCTTCGaa > 7:230417/1‑121 (MQ=255) gCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCT‑CGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGcgccgc > 3:103228/1‑149 (MQ=255) cccGCTCCCaccggtacgtcccaggcttcagccttcgaaattaccctgcgggagcgggcgggcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagtt < 4:54506‑M1/149‑141 (MQ=255) cccGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagtt > 8:156205‑M1/1‑9 (MQ=255) cccGCGCCCaccggtaagtcacaggcttcagccttctaaattccccggcgggcgcgggcgtgcccgctaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagtt < 8:21095‑M1/149‑141 (MQ=255) ccGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttg < 5:62866‑M2/149‑102 (MQ=255) ccGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCT‑CGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGcc > 1:64648/1‑149 (MQ=255) cGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCAGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCT‑CGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCg > 8:12474/1‑149 (MQ=255) | GGAAAGCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCT‑CGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCG > NC_002947/5914036‑5914332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |