New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 591418422 (0.520)4 (0.120) 4/202 NT 16.3% intergenic (+76/+77) spuI/argA glutamylpolyamine synthetase/amino acid N‑acetyltransferase
?NC_002947 = 5914224 24 (0.730)intergenic (+116/+37) spuI/argA glutamylpolyamine synthetase/amino acid N‑acetyltransferase

AACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAG  >  NC_002947/5914085‑5914372
                                                                                                                                           |                                                                                                                                                     
aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCCCGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGGGACGTACCGGTgggagcggg                                                                                                                                              <  4:54506‑M2/149‑10 (MQ=255)
aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcggg                                                                                                                                              >  8:156205‑M2/1‑140 (MQ=255)
aaCTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTAGCGGGCACGCCCGCGCCCGCCGGGGAATTTAGAAGGCTGAAGCCTGTGACTTACCGGTgggcgcggg                                                                                                                                              <  8:21095‑M2/149‑10 (MQ=255)
                ccGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCCCGCCCGCGGCCGGCGGGGTATTTGGAAGGGTGAAGGCGGTGGCGTTCCGGTGGGGGCGGGCGTGGCCGCGGAGCgg                                                                                                                              >  3:225858/1‑149 (MQ=255)
                 cGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCCACGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagaggg                                                                                                                             >  7:103481‑M2/1‑123 (MQ=255)
                    gaaaaCGAAACCGCCGCCCCTCACGGGCGGCGTTTTTGTTTGAGACCGGGGTCGCCCTCTGCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGACGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGggcgg                                                                                                                          <  3:54506/147‑1 (MQ=39)
                                                   gTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCGGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGGTTACAGGGGCTTCTCGAAAATCtt                                                                                          >  1:13780/1‑149 (MQ=255)
                                                   gTTTTTGTTTGAGACCGGTGTCGCCCTCTTCCCGGGCACCCCCCCTACCCCAGCGGAATTTCCAAGGCATAAGCCAGTGACATACCTGTGGGACCGCGCCTGCCCGCCAAGAGGGCGGCCCAGGGGTACCGGGGCTTCTCCaaaaaat                                                                                           >  2:44077/1‑145 (MQ=255)
                                                     ttttGTTTGAGACGGGTGTCGCCCTCTGCGCGGCCCCCCCCGCCCCCCCTGGTAAATTCCTACGGCTGACGCCTGTTACTTCCCTGGGGGCGGGGGGGTGCCCGCTAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTc                                                                                         <  2:170949/148‑1 (MQ=255)
                                                                       ccGCCCTCTGCGCGGCCACGCCCGCTCCCGCTGGTTAATTGCCACGGCTCACGCCTGTTACTTACGGGTGGGAGCGGGCGGGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGt                                                                      <  7:21095/148‑1 (MQ=255)
                                                                          cccTCTTCGCGGGCACGCCCGCTCCCGCAGGTTAATTTCTAAGGCTGACGCCTGTTACTTACCTGGGGCAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACa                                                                   <  2:13780/149‑1 (MQ=255)
                                                                                tCGCGGGCAGGCCCGCTCCCGCAGGGTATTTTCGAAGGCTGATGCTTGTGACTTACCTGGGGGAGGGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGa                                                               <  1:44077/148‑1 (MQ=255)
                                                                                   cgGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGaa                                                                                      >  7:230417/1‑121 (MQ=255)
                                                                                          gCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGcgccgc                                                   >  3:103228/1‑149 (MQ=255)
                                                                                            ccGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttg                                                  <  5:62866‑M2/149‑102 (MQ=255)
                                                                                                  ccGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGcc                                           >  1:64648/1‑149 (MQ=255)
                                                                                                   cGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCAGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCg                                          >  8:12474/1‑149 (MQ=255)
                                                                                                    gCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgt                                                                                 <  5:122363‑M2/110‑71 (MQ=255)
                                                                                                    gCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgt                                                                                 >  6:122363‑M2/1‑40 (MQ=255)
                                                                                                       ggttAATTTCTAAGTCTTAAGCATTTGACTTCCGTTTGGTAGGGGGCGTGCCCGCTAATAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCTCGCCGCCGGCAGCCGCTcc                                      <  1:210943/146‑1 (MQ=255)
                                                                                                              ttCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGtt                                                                        <  4:183408/108‑1 (MQ=255)
                                                                                                              ttCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGtt                                                                        >  3:183408/1‑108 (MQ=255)
                                                                                                              ttCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCAc                                    <  2:99971/144‑1 (MQ=255)
                                                                                                              ttCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCAc                                    >  1:99971/1‑144 (MQ=255)
                                                                                                                  aaGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCgg                           >  5:208765/1‑149 (MQ=255)
                                                                                                                  aaGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCgg                           >  5:245449/1‑149 (MQ=255)
                                                                                                                   aGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactcgaggtcggagatcgagtg                           >  6:62866‑M2/1‑25 (MQ=255)
                                                                                                                    ggCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGgcg                         <  6:245449/149‑1 (MQ=255)
                                                                                                                      cTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCAc                                    <  8:46560/136‑1 (MQ=255)
                                                                                                                      cTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCAc                                    >  7:46560/1‑136 (MQ=255)
                                                                                                                             cTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCcgc                >  2:71126/1‑149 (MQ=255)
                                                                                                                                 gACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTc            >  4:260569/1‑149 (MQ=255)
                                                                                                                                  aCTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCAGCCGGCAGCCGCTCCCCGCCACTCGGCGCAAAGCCGCGCTcg           >  2:64938/1‑149 (MQ=255)
                                                                                                                                    ttACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCGTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTcgcg         >  1:190685/1‑149 (MQ=255)
                                                                                                                                        cTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAAc     >  2:72600/1‑149 (MQ=255)
                                                                                                                                          gtgGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCgg        <  7:59315/144‑1 (MQ=255)
                                                                                                                                          gtgGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCgg        >  8:59315/1‑144 (MQ=255)
                                                                                                                                           tgGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACcag  >  8:119874/1‑149 (MQ=255)
                                                                                                                                           tgGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACcag  >  7:45034/1‑149 (MQ=255)
                                                                                                                                           |                                                                                                                                                     
AACTGGTACCTGCATACCGTGTAAACGAAAACGCCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCCGCTCCACGCCACTCGGCGCAAAGCCGCGCTCGCGGAACCAG  >  NC_002947/5914085‑5914372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.