New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6006760	48 (1.140)	4 (0.100)	4/248	NT	8.2%	coding (798/927 nt)	PP_5261	LysR family transcriptional regulator
	?	NC_002947	= 6006781	43 (1.060)					coding (777/927 nt)	PP_5261	LysR family transcriptional regulator

AGGCCGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCGGCAATCATGCCCAGCTCCAGGGTATCGAACACCTGGCCGCCC  >  NC_002947/6006615‑6006907                                                                                                                                                  |                                                                                                                                                    agGCCGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGACGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCg                                                                                                                                                  >  1:209840/1‑149 (MQ=255)    ccGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTg                                                                                                                                               <  7:24155/149‑1 (MQ=255)     cGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTgg                                                                                                                                              >  4:135745/1‑149 (MQ=255)     cGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCAGTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTgg                                                                                                                                              >  4:139484/1‑149 (MQ=255)           aGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCAccg                                                                                                                                        <  8:24813/149‑1 (MQ=255)            ggTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCAccgc                                                                                                                                       >  8:186990/1‑149 (MQ=255)                   aaaGACGCGGCAGGATTTCCACATACGGCAAATCCATTGCCGCAACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCAGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGc                                                                                                                                >  5:37941/1‑149 (MQ=255)                    aaGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGc                                                                                                                                >  5:211436/1‑148 (MQ=255)                      gACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCcat                                                                                                                             >  3:172516‑M2/1‑146 (MQ=255)                        cgcgGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATccgacggcggtgcccagcggcatgga                                                                                                                            <  1:155482‑M1/149‑27 (MQ=255)                        cgcgGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCcatgg                                                                                                                           >  3:132843‑M2/1‑144 (MQ=255)                           ggCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGACCGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCCTCGTCCATGGCAg                                                                                                                        >  3:225498/1‑149 (MQ=255)                            gCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGgccgacggcggtgcccagcggcatggatta                                                                                                                       <  4:168519‑M1/149‑31 (MQ=255)                            gCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAgg                                                                                                                       <  7:186990/149‑1 (MQ=255)                               ggATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTc                                                                                                                    <  7:63185/149‑1 (MQ=255)                                  tttCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAg                                                                                                                 <  2:209840/149‑1 (MQ=255)                                     ccACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAgcgc                                                                                                              >  7:205385/1‑149 (MQ=255)                                           ccGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTgc                                                                                                        >  7:190177/1‑149 (MQ=255)                                            cGGCAAATCCAGTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTgc                                                                                                        <  3:139484/148‑1 (MQ=255)                                            cGGCAAATCCAATGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTgc                                                                                                        <  3:135745/148‑1 (MQ=255)                                                   tCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCgg                                                                                                                                 <  1:85756/116‑1 (MQ=255)                                                   tCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCgg                                                                                                                                 >  2:85756/1‑116 (MQ=255)                                                      aTTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGgccgacggcggtgcccagcggcatggattacta                                                                                                                    <  3:264452‑M1/126‑34 (MQ=255)                                                      aTTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGgccgacggcggtgcccagcggcatggattacta                                                                                                                    >  4:264452‑M1/1‑93 (MQ=255)                                                      aTTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTc                                                                                             >  1:11732/1‑149 (MQ=255)                                                           cgccACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGcca                                                                                        <  8:205385/149‑1 (MQ=255)                                                            gccACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGccac                                                                                       >  6:240990/1‑149 (MQ=255)                                                              cACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGccacca                                                                                     >  1:26693/1‑149 (MQ=255)                                                              cACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGccacca                                                                                     <  5:240990/149‑1 (MQ=255)                                                                ccTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCTGc                                                                                          <  3:226314/142‑1 (MQ=255)                                                                ccTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGc                                                                                          >  4:226314/1‑142 (MQ=255)                                                                 cTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCAt                                                                                    >  1:127974/1‑147 (MQ=255)                                                                 cTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCAt                                                                                    >  6:29953/1‑147 (MQ=255)                                                                    gCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATcagc                                                                                <  7:216494/148‑1 (MQ=255)                                                                       ttCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCGCATCTTCGGCCACCATCAGCAGGt                                                                            >  6:4326/1‑149 (MQ=255)                                                                          cAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCAATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCCCCACATCTTCGGCCACCATCAGCAGGTCGc                                                                         >  3:131150/1‑149 (MQ=255)                                                                             gaactgaCTCAACCGCCGCAACCGCTCGGCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCa                                                                      <  4:131150/143‑1 (MQ=255)                                                                               aCGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATg                                                                    <  2:11732/149‑1 (MQ=255)                                                                                cGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCTCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATgg                                                                   <  8:190177/149‑1 (MQ=255)                                                                                       aaCCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATccc                                                            >  4:46516/1‑149 (MQ=255)                                                                                        aCCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGG‑CACCATCAGCAGGTCGCCCATGGATATCCCGt                                                          <  6:78034/149‑1 (MQ=255)                                                                                         ccgccgCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGt                                                          <  1:118484/149‑1 (MQ=255)                                                                                           gccgcAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAg                                                        <  5:29953/149‑1 (MQ=255)                                                                                                  ccGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCCGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCAcgcg                                                 >  3:237263/1‑149 (MQ=255)                                                                                                   cGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACgcgc                                                >  8:211326/1‑149 (MQ=255)                                                                                                      tCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACGcgccgc                                             >  6:37891/1‑149 (MQ=255)                                                                                                        gccgccTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGTAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCgg                                           >  6:271274/1‑149 (MQ=255)                                                                                                                            gCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCGGCAATCATGCCCAGCTCCAgg                       <  2:26693/149‑1 (MQ=255)                                                                                                                            gCCACACCAGGTACTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCGGCAATCATGCCCAGCTCCAgg                       <  4:42036/149‑1 (MQ=255)                                                                                                                             ccACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCGGCAATCATGCCCAGCTCCAggg                      <  6:211436/149‑1 (MQ=255)                                                                                                                                  ccAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGTAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCGGCAATCATGCCCAGCTCCAGGGTATCg                 <  5:271274/149‑1 (MQ=255)                                                                                                                                  ccAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCGGCAATCATGCCCAGCTCCAGGGTATCg                 <  2:127974/149‑1 (MQ=255)                                                                                                                                       tagtaATCCATGCCGCTGGGCACCGCCGTCGGCcatggattactacctggtgtggccgcgcacccggcgaggcggcgagcggttgcggcggttgagtgcgttcctggaaggcgaggtggcggcaat                                   <  3:264452‑M2/126‑94 (MQ=255)                                                                                                                                       tagtaATCCATGCCGCTGGGCACCGCCGTCGGCcatggattactacctggtgtggccgcgcacccggcgaggcggcgagcggttgcggcggttgagtgcgttcctggaaggcgaggtggcggcaat                                   >  4:264452‑M2/1‑33 (MQ=255)                                                                                                                                       tagtaATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCGGCAATCATGCCCAGCTCCAGGGTATCGAacac            >  3:217531/1‑149 (MQ=255)                                                                                                                                          taATCCATGCCGCTGGGCACCGCCGTCGGCcatggattactacctggtgtggccgcgcacccggcgaggcggcgagcggttgcggcggttgagtgcgttcctggaaggcgaggtggcggcaatggatttgccggatgtggaaatcctgc         <  4:168519‑M2/149‑120 (MQ=255)                                                                                                                                           aaTCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCAAGCATAAACCGTAGCCACGCGCTGCGGCAATCATGCCCAGCTCCAGGGTATCGAACACCTgg        >  4:125247/1‑149 (MQ=255)                                                                                                                                            aTCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCGGCAATCATGCCCAGCTCCAGGGTATCGAACACCTGgc       >  2:94863/1‑149 (MQ=255)                                                                                                                                             tCCATGCCGCTGGGCACCGCCGTCGGCatggattactacctggtgtggccgcgcacccggcgaggcggcgagcggttgcggcggttgagtgcgttcctggaaggcgaggtggcggcaatggatttgccggatgtggaaatcctgccgcg      <  1:155482‑M2/149‑123 (MQ=255)                                                                                                                                              ccATGgccgacggcggtgcccagcggcatggattactacctggtgtggccgcgcacccggcgaggcggcgagcggttgcggcggttgagtgcgttcctggaaggcgaggtggcggcaatggatttgccggatgtggaaatcctgccgcg     >  3:132843‑M1/1‑5 (MQ=255)                                                                                                                                               cATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCGGCAATCATGCCCAGCTCCAGGGTATCGAACACCTGgccgc    >  8:146598/1‑149 (MQ=255)                                                                                                                                                aTGgccgacggcggtgcccagcggcatggattactacctggtgtggccgcgcacccggcgaggcggcgagcggttgcggcggttgagtgcgttcctggaaggcgaggtggcggcaatggatttgccggatgtggaaatcctgccgcgtc   >  3:172516‑M1/1‑3 (MQ=255)                                                                                                                                                 tGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCGGCAATCATGCCCAGCTCCAGGGTATCGAACACCTGGCCGccc  <  7:211326/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    AGGCCGGTGCAGGTGATCAAAGACGCGGCAGGATTTCCACATCCGGCAAATCCATTGCCGCCACCTCGCCTTCCAGGAACGCACTCAACCGCCGCAACCGCTCGCCGCCTCGCCGGGTGCGCGGCCACACCAGGTAGTAATCCATGCCGCTGGGCACCGCCGTCGGCCATGGCAGGCTCAAGCGCTTCTGCGCCACATCTTCGGCCACCATCAGCAGGTCGCCCATGGATATCCCGTAGCCACGCGCCGCGGCAATCATGCCCAGCTCCAGGGTATCGAACACCTGGCCGCCC  >  NC_002947/6006615‑6006907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.