New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1203805 =	52 (1.230)	3 (0.070)	3/246	NT	5.5%	coding (148/645 nt)	gspN	type II secretion pathway protein GspN
	?	NC_002947	1203850 =	53 (1.320)					coding (193/645 nt)	gspN	type II secretion pathway protein GspN

TCCGGCCAATTGGGTGGTGCGTGCGTTCGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGTGGCAGGGTGTGTTGAGGATGCAG  >  NC_002947/1203705‑1203996                                                                                                                                                  |                                                                                                                                                   gcgagaccgtcgccaaagcccccttggctgatgcctccagccgccaatgccaaggccagccttctgcacgcaactgccaggcctggccctggaaccccacTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTgg                                                                                                                                                 >  2:206956‑M1/101‑149 (MQ=255)  ccGGCCAATTGGGTGGTGCGTGCGTTCGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCTGCCCTGGCGCTTGCAGGCTAATGCGCAAGTgg                                                                                                                                                 <  7:155672/148‑1 (MQ=255)     gCCAATTGGGTGGTGCGTGCGTTCGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGtt                                                                                                                                             >  4:91074/1‑149 (MQ=255)       cAATTGGGTGGTGCGTGCGTTCGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTcc                                                                                                                                           <  6:77249/149‑1 (MQ=255)               tggtgCGTGCGTTCGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAg                                                                                                                                   >  4:203329/1‑149 (MQ=255)                   gcgtgcgtTCGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCt                                                                                                                               >  1:236278/1‑149 (MQ=255)                    cgtgcgtTCGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCt                                                                                                                               <  3:234716/148‑1 (MQ=255)                     gtgcgtTCGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAg                                                                                                                                   >  8:162952/1‑143 (MQ=255)                     gtgcgtTCGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAg                                                                                                                                   <  7:162952/143‑1 (MQ=255)                     gtgcgtTCGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTgg                                                                                                                             >  4:82623/1‑149 (MQ=255)                            cGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTg                                                                                                                              <  1:106546/141‑1 (MQ=255)                              gCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGt                                                                                                                    <  7:219340/149‑1 (MQ=255)                                   ccGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAg                                                                                                                <  3:246648/148‑1 (MQ=255)                                       agccgccaatgccaaggccagccttctgcacgcaactgccaggcctggccctggaaccccacTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAg                                                                                                                                                    <  7:3502‑M1/46‑1 (MQ=255)                                       agccgccaatgccaaggccagccttctgcacgcaactgccaggcctggccctggaaccccacTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAg                                                                                                                                                    >  8:3502‑M1/63‑108 (MQ=255)                                          gcgATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTgg                                                                                                        >  1:199986/1‑149 (MQ=255)                                            gATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCt                                                                                                                               <  5:51260/124‑1 (MQ=255)                                            gATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCt                                                                                                                               >  6:51260/1‑124 (MQ=255)                                               gTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTg                                                                                                   >  3:98043/1‑149 (MQ=255)                                                ttGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGTGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTg                                                                                                   <  2:159042/148‑1 (MQ=255)                                                  ggtggtAGCCTCTGGCAATGGCAGGCAGAACAATGGGGGGCGGTCGGGCCGTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCGATTGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGc                                                                                                 <  8:236844/148‑1 (MQ=255)                                                       aaGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGaa                                                                                                              >  6:74425/1‑130 (MQ=255)                                                       aaGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGaa                                                                                                              >  6:259254/1‑130 (MQ=255)                                                       aaGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGaa                                                                                                              <  5:74425/130‑1 (MQ=255)                                                       aaGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGaa                                                                                                              <  5:259254/130‑1 (MQ=255)                                                        aGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTggc                                                                                           <  2:236278/148‑1 (MQ=255)                                                             ctGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTg                                                                                      >  5:156993/1‑148 (MQ=255)                                                              tGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTg                                                                                      >  3:151984/1‑147 (MQ=255)                                                                gCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGa                                                                                    <  3:82623/147‑1 (MQ=255)                                                                gCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAg                                                                                   <  4:151984/148‑1 (MQ=255)                                                                    gggCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGGTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATc                                                                              <  3:203329/149‑1 (MQ=255)                                                                      gcaggcaCAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAg                                                                            >  8:76272/1‑149 (MQ=255)                                                                            acaacaATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAgg                                                                      >  1:1152/1‑149 (MQ=255)                                                                            acaacaATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAgg                                                                      <  6:156993/149‑1 (MQ=255)                                                                            acaacaATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGGGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAgg                                                                      <  7:192548/149‑1 (MQ=255)                                                                               acaaTGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAggggg                                                                   <  2:1152/149‑1 (MQ=255)                                                                                        gCCGTTCGGGCCTTTGCGCTGGACTCTTCAGCCCTGGCTCTTGCAGGCTAATGCGCAAGTGGGGTTCCATGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGa                                                          <  7:56507/149‑1 (MQ=255)                                                                                           ggTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACgg                                                       >  1:125061/1‑149 (MQ=255)                                                                                             tCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGtc                                                     >  1:163128/1‑149 (MQ=255)                                                                                              cGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGtct                                                    >  2:10612/1‑149 (MQ=255)                                                                                              cGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGtct                                                    >  2:6251/1‑149 (MQ=255)                                                                                                 gCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTgg                                                             <  5:143607/137‑1 (MQ=255)                                                                                                 gCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCAGTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGCCGGTCTCGa                                                 >  8:186375/1‑149 (MQ=255)                                                                                                 gCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGACTTGGCATTGGCGGATGGAGGCATCAGCCAAGGTGGCTTTgg                                                             >  6:143607/1‑137 (MQ=255)                                                                                                 ccacttgcgcattagcctgcaagcgccagggctgcagcgtccagcgcaaGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTcgc                                                 >  2:206956‑M2/50‑148 (MQ=255)                                                                                                    cttgcgcattagcctgcaagcgccagggctgcagcgtccagcgcaaGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCt                                                                                       >  8:3502‑M2/47‑108 (MQ=255)                                                                                                    cttgcgcattagcctgcaagcgccagggctgcagcgtccagcgcaaGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCt                                                                                       <  7:3502‑M2/62‑1 (MQ=255)                                                                                                           tGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCg                                       >  5:262557/1‑149 (MQ=255)                                                                                                               cGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTg                                   <  3:91074/149‑1 (MQ=255)                                                                                                                   gCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTggccg                               >  7:195691/1‑149 (MQ=255)                                                                                                                    cAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTggccgg                              >  1:162444/1‑149 (MQ=255)                                                                                                                    cAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTggccgg                              >  3:31238/1‑149 (MQ=255)                                                                                                                         cTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGt                         >  8:111016/1‑149 (MQ=255)                                                                                                                            gcgcTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGTg                        <  4:98043/147‑1 (MQ=255)                                                                                                                              gcTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGTGGCAg                    <  2:125061/149‑1 (MQ=255)                                                                                                                              gcTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGTGGCAg                    <  2:162444/149‑1 (MQ=255)                                                                                                                                  gCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGTGGCAGGgt                 <  7:111016/148‑1 (MQ=255)                                                                                                                                   cAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGc                                      >  3:111252/1‑126 (MQ=255)                                                                                                                                   cAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGTGGCAGGgtgt               <  7:76272/149‑1 (MQ=255)                                                                                                                                   cAGGCAAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCACAAGGCTGGCCTTGGCAATGACGGCTGAAGGCATCAGCCAAGGGGGCGTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGTGGCAGCgtgt               >  5:189015/1‑149 (MQ=255)                                                                                                                                        tAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGTGGCAGGGTGTGtt            >  2:109496/1‑147 (MQ=255)                                                                                                                                             cgcaaGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGTGGCAGGGTGTGTTGAGGATg     <  6:262557‑M2/144‑1 (MQ=255)                                                                                                                                                aaGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGTGGCAGGGTGTGTTGAGGATGCAg  >  5:233413‑M2/3‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                   TCCGGCCAATTGGGTGGTGCGTGCGTTCGGCCTGCCGGTACGCGATGTTGGTGGAAGCCTCTGGCAAGGGCAGGCACAACAATGGGGGCCGGTCGGGCCTTTGCGCTGGACGCTGCAGCCCTGGCGCTTGCAGGCTAATGCGCAAGTGGGGTTCCAGGGCCAGGCCTGGCAGTTGCGTGCAGAAGGCTGGCCTTGGCATTGGCGGCTGGAGGCATCAGCCAAGGGGGCTTTGGCGACGGTCTCGACGGATTACCGCCTGGCCGGCCAGTGGCAGGGTGTGTTGAGGATGCAG  >  NC_002947/1203705‑1203996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.