New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4559104	47 (1.110)	5 (0.130)	5/244	NT	9.9%	coding (60/963 nt)	PP_4046	hypothetical protein
	?	NC_002947	= 4559118	47 (1.180)					coding (46/963 nt)	PP_4046	hypothetical protein

TGGATGGCCAGCTCCAGTGCCATGTGCGCCCAGTCGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCATCTCTACGCCTTGCATGAATGTCTGAGGCCCTA  >  NC_002947/4558970‑4559264                                                                                                                                                     |                                                                                                                                                   tGGATGGCCAGCTCCAGTGCCATGTGCGCCCAGTCGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAAtgctg                                                                                                                                                    >  1:16276/1‑149 (MQ=255)   gATGGCCAGCTCCAGTGCCATGTGCGCCCAGTCGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGct                                                                                                                                                  <  3:35691‑M2/149‑3 (MQ=255)           gCTCCAGTGCCATGTGCGCCCAGTCGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATc                                                                                                                                          <  3:209886/149‑1 (MQ=255)               cAGTGCCATGTGCGCCCAGTCGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCAc                                                                                                                                       <  4:35691/148‑1 (MQ=255)               cAGTGCCATGTGCGCCCAGTCGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCAc                                                                                                                                       <  8:46643/148‑1 (MQ=255)                 gTGCCATGTGCGCCCAGTCGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACggg                                                                                                                                    >  1:255998/1‑149 (MQ=255)                 gTGCCATGTGCGCCCAGTCGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACgg                                                                                                                                     <  5:272480/148‑1 (MQ=255)                 gTGCCATGTGCGCCCAGTCGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACgg                                                                                                                                     >  6:272480/1‑148 (MQ=255)                        gtgCGCCCAGTCGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCt                                                                                                                             >  1:248590/1‑149 (MQ=255)                                   cGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTc                                                                                                                   >  8:20594/1‑148 (MQ=255)                                    gagaCTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCg                                                                                                                  >  2:84124/1‑148 (MQ=255)                                    gagaCTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCg                                                                                                                  >  6:191801/1‑148 (MQ=255)                                           aGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTc                                                                                                          <  1:238052/149‑1 (MQ=255)                                             gCCACGGGAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGGGTATCAGGGTCGGCCAACTCCTTCTCTTTTTCACGGGTCGAGGCGTGTTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCGGTCGAACGGGTCCa                                                                                                        >  5:66183/1‑149 (MQ=255)                                                aCGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAg                                                                                                     <  5:191801/149‑1 (MQ=255)                                                        gatgCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGAt                                                                                                                         >  6:255146/1‑121 (MQ=255)                                                        gatgCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGAt                                                                                                                         <  5:255146/121‑1 (MQ=255)                                                             ttGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGCAGCATTACCACGCctcgacccgtgaaaaagagcaggagtt                                                                                                                         >  1:118945‑M2/1‑89 (MQ=255)                                                             ttGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGCAGCATTACCACGCctcgacccgtgaaaaagagcaggagtt                                                                                                                         <  2:118945‑M2/116‑28 (MQ=255)                                                               gcgcTCGGCGGACGCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACg                                                                                        <  5:273686/147‑1 (MQ=255)                                                                               gCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGCGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCAcc                                                                        >  4:116071/1‑147 (MQ=255)                                                                                   gCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAgcgc                                                                  <  2:16276/149‑1 (MQ=255)                                                                                            gtgtATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCa                                                                          >  6:160565/1‑132 (MQ=255)                                                                                            gtgtATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCa                                                                          <  5:160565/132‑1 (MQ=255)                                                                                               tATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCAc                                                          <  3:220336/145‑1 (MQ=255)                                                                                               tATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCAc                                                          >  4:220336/1‑145 (MQ=255)                                                                                                aTCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAgc                                                     >  7:58765/1‑149 (MQ=255)                                                                                                   aGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGcc                                                  >  8:182563/1‑149 (MQ=255)                                                                                                     ggTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCa                                                >  8:92890/1‑149 (MQ=255)                                                                                                         ggCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCCCGGAGCGCCCAtttt                                            >  1:250561/1‑149 (MQ=255)                                                                                                          tcAAACTCCTGCGCTTTTTCCCGGGTCGCGGCGTGGTACTGCTGCTCGACCAGCCACGGGGCGCGCTTGAGGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTc                                           <  6:66183/148‑1 (MQ=255)                                                                                                           cAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTc                                           <  4:171187/148‑1 (MQ=255)                                                                                                           cAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTc                                           >  3:171187/1‑148 (MQ=255)                                                                                                           cAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCg                                          <  7:20594/149‑1 (MQ=255)                                                                                                            aaaCTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTc                                                                           <  3:229665/115‑1 (MQ=255)                                                                                                             aaCTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCt                                        <  8:58765/149‑1 (MQ=255)                                                                                                                tCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCTCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCACTCACGCTATAAGCCTTTCACCAAGCGACAAACCAAGGAGCGCCCATTTTCGCTCg                                      >  7:136918/1‑148 (MQ=255)                                                                                                                  cTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGc                                    <  2:248590/148‑1 (MQ=255)                                                                                                                  cTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTGCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCa                                   >  5:232147/1‑149 (MQ=255)                                                                                                                    gCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCAt                                  >  2:44118/1‑148 (MQ=255)                                                                                                                      tctTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCAtctc                               >  1:173404/1‑149 (MQ=255)                                                                                                                        tttttCACGGGTCGAGGCGTGGTAATGCTGctcgacccgtgaaaaagagcaggagtttgccgaccctgatacacaggcattgctggccgagtccgccgagcgcaagcatcattaccgtggccttagtctcgactgggc                                        >  1:120689‑M2/1‑30 (MQ=255)                                                                                                                        tttttCACGGGTCGAGGCGTGGTAATGCTGctcgacccgtgaaaaagagcaggagtttgccgaccctgatacacaggcattgctggccgagtccgccgagcgcaagcatcattaccgtggccttagtctcgactgggc                                        <  2:120689‑M2/138‑109 (MQ=255)                                                                                                                        tttttCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCaa                                                                      >  7:159630/1‑108 (MQ=255)                                                                                                                        tttttCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCaa                                                                      <  8:159630/108‑1 (MQ=255)                                                                                                                        tttttCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAgc                                                                    >  3:229294/1‑110 (MQ=255)                                                                                                                        tttttCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAgc                                                                    <  4:229294/110‑1 (MQ=255)                                                                                                                         ttttCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAg                                                                     >  6:109868/1‑108 (MQ=255)                                                                                                                         ttttCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAg                                                                     <  5:109868/108‑1 (MQ=255)                                                                                                                          tttCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCATATCTACg                           >  1:64673/1‑149 (MQ=255)                                                                                                                              aCGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAGGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCATGTCTACGCCtt                       >  7:75033/1‑149 (MQ=255)                                                                                                                                  gTCGAGGCGTGGTAATGCTGctcgacccgtgaaaaagagcaggagtttgccgaccctgatacacaggcattgctggccgagtccgccgagcgcaagcatcattaccgtggccttagtctcgactgggcgcacatggcactggagctggc                   <  4:129817‑M2/149‑130 (MQ=255)                                                                                                                                        gCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTc                                                                                               <  3:264231/67‑1 (MQ=255)                                                                                                                                        gCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTc                                                                                               >  4:264231/1‑67 (MQ=255)                                                                                                                                         cGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCATCTCTACGCCTTGCATGAATGTc            <  6:232147/149‑1 (MQ=255)                                                                                                                                                  gctgctCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCATCTCTACGCCTTGCATGAATGt             >  7:33157/1‑139 (MQ=255)                                                                                                                                                  gctgctCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCATCTCTACGCCTTGCATGAATGt             <  8:33157/139‑1 (MQ=255)                                                                                                                                                    tgctCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCATCTCTACGCCTTGCATGAATGTCTGAGGCCCTa  >  3:260296/1‑148 (MQ=255)                                                                                                                                                     gctCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCATCTCTACGCCTTGCATGAATGTCTGAGGCCCTa  >  8:136719/1‑147 (MQ=255)                                                                                                                                                     |                                                                                                                                                   TGGATGGCCAGCTCCAGTGCCATGTGCGCCCAGTCGAGACTAAGGCCACGGTAATGATGCTTGCGCTCGGCGGACTCGGCCAGCAATGCCTGTGTATCAGGGTCGGCAAACTCCTGCTCTTTTTCACGGGTCGAGGCGTGGTAATGCTGCTCGACCATCCACGGGTCGCGCTTGATGCTGTCGAACGGGTCCATAGGCCCTCCCGCACGCTATAAGCCTTTCACCAAGCGCCAAACCACGGAGCGCCCATTTTCGCTCGGCATCTCTACGCCTTGCATGAATGTCTGAGGCCCTA  >  NC_002947/4558970‑4559264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.