New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5118958 =	49 (1.160)	3 (0.070)	3/252	NT	5.4%	coding (732/1341 nt)	PP_4505	sensor histidine kinase
	?	NC_002947	5119003 =	57 (1.380)					coding (777/1341 nt)	PP_4505	sensor histidine kinase

TGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGC  >  NC_002947/5118855‑5119144                                                                                                                                                       |                                                                                                                                               tGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCt                                                                                                                                                >  2:33346/1‑149 (MQ=255)    tGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACAATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACCAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGCGCCt                                                                                                                                                >  4:60933/1‑146 (MQ=255)      ttcggcatccacccgggccagggcgaggatttcgctgatcaggtcttccaggcggtcgcattcgcgggtcaggcgcggccacagcgcttgccgctgctcaGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCt                                                                                                                                                <  4:220042‑M1/46‑1 (MQ=255)      ttcggcatccacccgggccagggcgaggatttcgctgatcaggtcttccaggcggtcgcattcgcgggtcaggcgcggccacagcgcttgccgctgctcaGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGa                                                                                                                                              >  3:220042‑M1/101‑148 (MQ=255)         aaGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCg                                                                                                                                        >  1:10726/1‑149 (MQ=255)                 caacaaGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAgcgc                                                                                                                                >  7:191055/1‑149 (MQ=255)                  aacaaGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTCCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCt                                                                                                                               <  8:40920/149‑1 (MQ=255)                    caaGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgt                                                                                                                             >  8:99664/1‑149 (MQ=255)                       gATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGc                                                                                                                          <  3:105854/149‑1 (MQ=255)                           ggCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑cgcg                                                                                                                     <  3:161631/149‑1 (MQ=255)                            gcgcACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCACGCGCTGTGGC‑Cgcgc                                                                                                                    >  2:265887/1‑149 (MQ=255)                             cgcACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGcc                                                                                                                   <  8:191055/149‑1 (MQ=255)                             cgcACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGcc                                                                                                                   >  3:158652/1‑149 (MQ=255)                                  gCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTCCGGGCACTGGCCCGGCTCCGAATCGCACTGGCACTGCCCGAACCCGCCGAGCCTGAGCAGCGTCAAGCGCTGTGGC‑CGCGCCTGa                                                                                                                >  1:80802/1‑149 (MQ=255)                                   ccTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgt                                                                                                                             >  2:204893/1‑134 (MQ=255)                                   ccTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgt                                                                                                                             >  2:201536/1‑134 (MQ=255)                                   ccTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgt                                                                                                                             <  1:204893/134‑1 (MQ=255)                                   ccTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCtgt                                                                                                                             <  1:201536/134‑1 (MQ=255)                                   ccTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGAccc                                                                                                             <  7:119802/149‑1 (MQ=255)                                                     cagccagcGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTg                                                                                            >  4:49460/1‑148 (MQ=255)                                                      agccagcGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTgg                                                                                           >  8:41744/1‑148 (MQ=255)                                                          agcgccagcTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGAc                                                                                      <  7:41744/149‑1 (MQ=255)                                                                         gcgACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATc                                                                       >  5:43739/1‑149 (MQ=255)                                                                         gcgACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATc                                                                       <  5:211946/149‑1 (MQ=255)                                                                                 tCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGccc                                                                <  2:10726/148‑1 (MQ=255)                                                                                 tCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAACACCTGATCAGCGAAATCCTCGCCCt                                                               >  4:256299/1‑149 (MQ=255)                                                                                   ccACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑cgctc                                                                                                                    <  5:163376/94‑3 (MQ=255)                                                                                   ccACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑Cgcgc                                                                                                                    >  6:163376/1‑94 (MQ=255)                                                                                   ccACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCt                                                                                    <  8:1513/126‑1 (MQ=255)                                                                                   ccACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCt                                                                                    >  7:1513/1‑126 (MQ=255)                                                                                    cACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGCCCTGATCAGCGCAATCCTCGCCCTGGc                                                            >  5:208789/1‑149 (MQ=255)                                                                                    cACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGc                                                            >  2:182014/1‑149 (MQ=255)                                                                                       gAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCg                                                         <  6:155888/149‑1 (MQ=255)                                                                                       gAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCg                                                         <  4:158652/149‑1 (MQ=255)                                                                                          cTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGAGAATGCGACCTCCTGGATGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGt                                                      <  2:80802/149‑1 (MQ=255)                                                                                             cgcTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTg                                                     <  7:99664/147‑1 (MQ=255)                                                                                                    gCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGc                                                <  4:132860/147‑1 (MQ=255)                                                                                                      cACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGAt                                                                                 <  7:107367/112‑1 (MQ=255)                                                                                                      cACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGAt                                                                                 >  8:107367/1‑112 (MQ=255)                                                                                                       tcaggctcggcgcgttcggccagggccagggcgatgcgcagccgggccTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGaa                                            >  3:220042‑M2/49‑148 (MQ=255)                                                                                                         aggctcggcgcgttcggccagggccagggcgatgcgcagccgggccTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGaa                                            <  4:220042‑M2/100‑1 (MQ=255)                                                                                                           GCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACaa                                         >  3:49460‑M1/1‑147 (MQ=255)                                                                                                             tcggcgcgttcggccagggccagggcgatgcgcagccgggccTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGcc                                      >  3:90084‑M2/43‑148 (MQ=255)                                                                                                             ccGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGccc                                     <  6:43739/149‑1 (MQ=255)                                                                                                             ccGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGcc                                      >  3:213913/1‑148 (MQ=255)                                                                                                              cGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCa                                    <  5:130010/149‑1 (MQ=255)                                                                                                                gCTGCGCTTCGCCCTGGCGCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATg                                  <  6:141309/149‑1 (MQ=255)                                                                                                                   gcgcATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGCAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGcc                                >  7:194285/1‑148 (MQ=255)                                                                                                                      cATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAAc                            <  1:182014/149‑1 (MQ=255)                                                                                                                          gccctggccctgGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCgg                         <  6:208789/148‑1 (MQ=255)                                                                                                                           ccctggccctggCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAg                                        >  6:177028/1‑132 (MQ=255)                                                                                                                           ccctggccctggCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTc                       >  1:174733/1‑149 (MQ=255)                                                                                                                           ccctggccctggCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCCACAGCCTGGAAGACCTGATAAGCGAAATCCTCGCCCTCGCCCGGGTGCATGCCGAACAAGCCAAAGCCGAACCGGTc                       >  6:197291/1‑149 (MQ=255)                                                                                                                            cctggccctggcCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTc                       >  2:25738/1‑148 (MQ=255)                                                                                                                            cctggccctggcCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCg                      >  3:77150/1‑149 (MQ=255)                                                                                                                             ctggccctggccGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTgg                                                             >  2:230917/1‑109 (MQ=255)                                                                                                                             ctggccctggccGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTgg                                                             <  1:230917/109‑1 (MQ=255)                                                                                                                             ctggccctggccGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGa                     >  3:171771/1‑149 (MQ=255)                                                                                                                                gccctggccGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGAc                    <  5:197291/147‑1 (MQ=255)                                                                                                                                      gccGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGCCCCGCGAATGCGACCGCCTGGAAGACCTGATCCGCGCAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGc            >  5:130449/1‑149 (MQ=255)                                                                                                                                       ccGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGcc           <  4:213913/149‑1 (MQ=255)                                                                                                                                        cGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTg                                                              >  4:107735/1‑97 (MQ=255)                                                                                                                                        cGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTg                                                              <  3:107735/97‑1 (MQ=255)                                                                                                                                           aCGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGCGCGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTa        >  1:40506/1‑149 (MQ=255)                                                                                                                                            cgcgCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACt      <  4:171771/149‑1 (MQ=255)                                                                                                                                                ccGAGCCTGAGCAGCGGCAAGCGCTGTTGC‑CGCGCCTGACCCGCGTAAGCGACCGCCTTGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCTACCTCAATGCCCTACTCGGc  <  3:60933/149‑1 (MQ=255)                                                                                                                                                 cGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGAGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCgg   >  6:107201/1‑147 (MQ=255)                                                                                                                                                       |                                                                                                                                               TGCTGGCCAAGGACTTCAACAAGATGGGCGCACGCCTGCAAAGCACCATTGGCAGCCAGCGCCAGCTGCTACGCGACGTGTCCCACGAACTGCGCTC‑‑GCCACTGGCCCGGCTGCGCATCGCCCTGGCCCTGGCCGAACGCGCCGAGCCTGAGCAGCGGCAAGCGCTGTGGC‑CGCGCCTGACCCGCGAATGCGACCGCCTGGAAGACCTGATCAGCGAAATCCTCGCCCTGGCCCGGGTGGATGCCGAACAAGCCCATGCCGAACCGGTCGACCTCAATGCCCTACTCGGC  >  NC_002947/5118855‑5119144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.