New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5211690	29 (0.690)	3 (0.080)	3/242	NT	8.7%	coding (260/1638 nt)	PP_4592	metal dependent hydrolase
	?	NC_002947	= 5211711	36 (0.910)					coding (239/1638 nt)	PP_4592	metal dependent hydrolase

CCAGCAGCAGGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGCCACAACCCCGAAAGGCCGGCAGGAACCACCGCTTGCAGGT  >  NC_002947/5211571‑5211858                                                                                                                                             |                                                                                                                                                    ccAGCAGCAGGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACtcatgaa                                                                                                                                              <  5:93721‑M2/148‑8 (MQ=255) ccAGCAGCAGGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACtcatgaa                                                                                                                                              <  2:71290‑M2/148‑8 (MQ=255)      agcagGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAacac                                                                                                                                        <  3:145210/149‑1 (MQ=255)        cagGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGa                                                                                                                                      >  8:140058/1‑149 (MQ=255)         agGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAACCACGCCCGCGCCACtcatgaa                                                                                                                                              >  4:246250‑M2/1‑133 (MQ=255)         agGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAACCACGCCCGCGCCACtcatgaa                                                                                                                                              <  3:246250‑M2/140‑8 (MQ=255)                  gcgGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACtcatgaa                                                                                                                                              <  7:196279‑M2/131‑8 (MQ=255)                  gcgGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACtcatgaa                                                                                                                                              >  8:196279‑M2/1‑124 (MQ=255)                   cgGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGTTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGc                                                                                                                           <  8:221414/149‑1 (MQ=255)                       aaaCTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAATCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCa                                                                                                                       <  6:93721/149‑1 (MQ=255)                       aaaCTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCa                                                                                                                       >  3:134849/1‑149 (MQ=255)                         aCTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCAc                                                                                                                      >  7:125193/1‑148 (MQ=255)                         aCTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACt                                                                                                                     <  7:140058/149‑1 (MQ=255)                               aCGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCTTCAATAAGTAAGCCGTAATGGTTCATGAAGTAAGCCACTCCAGCGCCACTCATGAAAAACAAGATAATTACAGGCTTCAatacatac                                                                                                               >  7:161064/1‑149 (MQ=255)                               aCGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATAc                                                                                                               <  7:157480/149‑1 (MQ=255)                                    aTCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCgg                                                                                                            >  8:34908/1‑147 (MQ=255)                                        aGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCa                                                                                                      <  8:238869/149‑1 (MQ=255)                                            gcgcACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAAtt                                                                                                   >  4:46081/1‑148 (MQ=255)                                              gcACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAAc                                                                                                <  1:71290/149‑1 (MQ=255)                                                aCCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGt                                                                                              <  4:134849/149‑1 (MQ=255)                                                aCCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGt                                                                                              >  2:225170/1‑149 (MQ=255)                                                     cGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACtcatgaa                                                                                                                                              >  7:19940‑M2/1‑89 (MQ=255)                                                     cGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACtcatgaa                                                                                                                                              <  8:19940‑M2/96‑8 (MQ=255)                                                     cGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAg                                                                                           <  8:125193/147‑1 (MQ=255)                                                               gTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGaa                                                                               >  3:87609/1‑149 (MQ=255)                                                                      ccATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAAcgcg                                                                           >  6:177650/1‑146 (MQ=255)                                                                                 aaCATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATcagcac                                                             <  7:34908/149‑1 (MQ=255)                                                                                  aCATGCCGGAGTTAATAAGTAAGCCGTACTTGTTCATGAAGTAAGCCAGGCCCTCGACACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGTAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATcagcac                                                             <  8:161064/148‑1 (MQ=255)                                                                                                   aGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAg                                           <  4:87609/149‑1 (MQ=255)                                                                                                           gTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGCCACAAcc                                   >  7:235921/1‑149 (MQ=255)                                                                                                            tACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGCCACAAccc                                  <  5:177650/149‑1 (MQ=255)                                                                                                              cTGGTTCATGAAGTAAGCCACGCCCGCGCCACtcatgaaccagtacggcgtacttattgacgccggcatgttccgtaatatggccgagaccaatattgcggaggtgcgcgacttgatgtcgttcaagtttgccgcgtatatcctgct                                  >  6:155122‑M2/1‑32 (MQ=255)                                                                                                              cTGGTTCATGAAGTAAGCCACGCCCGCGCCACtcatgaaccagtacggcgtacttattgacgccggcatgttccgtaatatggccgagaccaatattgcggaggtgcgcgacttgatgtcgttcaagtttgccgcgtatatcctgct                                  <  5:155122‑M2/147‑116 (MQ=255)                                                                                                               tGGTTCATGAAGTAAGCCACGCCCGCGCAACtcatgaaccagtacggcgtacttattgacgccggcatgttccgtaatatggccgagcccaatattgcggaggtgagcgacttgatgtcgttcaagtttgccgcgtatatcctgctgct                               <  5:169898‑M2/149‑119 (MQ=255)                                                                                                                 gTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAAc                                                      >  3:162117/1‑124 (MQ=255)                                                                                                                 gTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAAc                                                      <  4:162117/124‑1 (MQ=255)                                                                                                                 gTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGCCACAACCCCGaa                              <  3:46081/148‑1 (MQ=255)                                                                                                                     aTGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGGAAACGCCCGACTCAGCCACAACCGCGAATGGcc                         >  8:61396/1‑149 (MQ=255)                                                                                                                       gAAGTAAGCCACGCCCGCGCCCCTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAaga                                                                       >  5:228220/1‑101 (MQ=255)                                                                                                                       gAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAaga                                                                       <  6:228220/101‑1 (MQ=255)                                                                                                                           tAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTAACAACATACCGGAAGGCAATTAACGAGAGGATCAGATTGAAAGCGAAGAACATCACCACAGCAAACGCAAGACTCAGCCACAACCCAGAAAGGcctgaag                    >  8:124563/1‑143 (MQ=255)                                                                                                                              gCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGCCACAACCCCGaaa                             >  5:271664/1‑136 (MQ=255)                                                                                                                              gCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGCCACAACCCCGaaa                             <  6:271664/136‑1 (MQ=255)                                                                                                                              gCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGCCACAACCCCGAAAGGCCGGCAGGAac                >  7:89109/1‑149 (MQ=255)                                                                                                                                 aCGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGCCACAACCCCGAAAGGCCGGCAGGAaccac             >  5:197742/1‑149 (MQ=255)                                                                                                                                       gcgcCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGcc                                         >  4:179781/1‑115 (MQ=255)                                                                                                                                       gcgcCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGcc                                         <  3:179781/115‑1 (MQ=255)                                                                                                                                       gcgcCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGCCACAACCCCGAAAGGCCGGCAGGAACCACCGCTTg       <  8:235921/149‑1 (MQ=255)                                                                                                                                            aCTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGCCACAACCCCGAAAGGCCGGCAGGAACCACCGCTTGCAGGt  >  1:210658/1‑149 (MQ=255)                                                                                                                                             |                                                                                                                                                    CCAGCAGCAGGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAAGTAAGCCACGCCCGCGCCACTCATGAACAACACGATAAGTACCGGCTTCACTACATACCGGAAGGCAATTAACGTGAGGATCAGATTGAACGCGAAGAGCATCAGCACAGCAAACGCCAGACTCAGCCACAACCCCGAAAGGCCGGCAGGAACCACCGCTTGCAGGT  >  NC_002947/5211571‑5211858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.