New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5760360 =	45 (1.070)	4 (0.100)	4/246	NT	9.6%	coding (382/414 nt)	PP_5055	Sulfurtransferase
	?	NC_002947	5760404 =	32 (0.800)					coding (338/414 nt)	PP_5055	Sulfurtransferase

TCTCGAGCAGGTACTTGGCGCGCATGCAGTAGGGGCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCTTGTCCTGCGGGATGTTCACCGCGCCGACGATATGACC  >  NC_002947/5760257‑5760546                                                                                                                                                    |                                                                                                                                               tctcGAGCAGGTACTTGGCGCGCATGCAGTAGGGGCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCttt                                                                                                                                               >  7:235103/1‑149 (MQ=255)   gccaaccgcatgaccgagctgggcaagcataaagaaaagaccttgatcgtcgtcgacgcgatgggccagcagtccggcaccatttgccgcgagctgctcaaAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGa                                                                                                                                             >  5:37991‑M1/102‑149 (MQ=255)     gAGCAGGTACTTGGCGCGCATGCAGTAGGGGCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGa                                                                                                                                             <  7:50479/147‑1 (MQ=255)      aGCATGTACTTGGCGCGCATGCAGTAGGGGCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGagca                                                                                                                                          <  7:87743/149‑1 (MQ=255)           gTACTTGGCGCGCATGCAGTAGGGGCAGTAGTCTCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGag                                                                                                                                            >  1:8769/1‑142 (MQ=255)           gTACTTGGCGCGCATGCAGTAGGGGCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCAGCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGag                                                                                                                                            <  2:8769/142‑1 (MQ=255)              cTTGGCGCGCATGCAGTAGGGGCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTcgcg                                                                                                                                   <  6:10907/148‑1 (MQ=255)                   cgcgcATGCAGTAGGGGCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAAt                                                                                                                             <  8:57295/149‑1 (MQ=255)                           cAGTACGGGCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCg                                                                                                                      <  7:231210/148‑1 (MQ=255)                                  ggCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGActgctg                                                                                                              >  1:192579/1‑149 (MQ=255)                                  ggCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGActgctg                                                                                                              <  1:254197/149‑1 (MQ=255)                                   gCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTgg                                                                                                             >  4:2109/1‑149 (MQ=255)                                        agtCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGACCCAt                                                                                                        >  7:214440/1‑149 (MQ=255)                                         gtCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATc                                                                                                       <  1:10361/149‑1 (MQ=255)                                                   tAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTcgacga                                                                                             <  8:235103/149‑1 (MQ=255)                                                     gACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTcgacgac                                                                                            >  2:99574/1‑148 (MQ=255)                                                             cAGTCTTCATATGAGTTCACGAGGGGCAGGTTATCGGCTTTCCAGCTGGAAAAGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGt                                                                                   <  8:228401/149‑1 (MQ=255)                                                                      tatCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGtcttttcttt                                                                          <  3:33246/149‑1 (MQ=255)                                                                         cACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATg                                                                       >  2:269362/1‑149 (MQ=255)                                                                          aCTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGTGCAGCTAGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGc                                                                      >  1:86491/1‑149 (MQ=255)                                                                          aCTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGc                                                                      <  1:99574/149‑1 (MQ=255)                                                                               aCCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGTGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGcc                                                                 >  2:6992/1‑149 (MQ=255)                                                                                        aGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAAt                                                                                                                             >  2:78820/1‑80 (MQ=255)                                                                                        aGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAAt                                                                                                                             <  1:78820/80‑1 (MQ=255)                                                                                                  cTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTg                                              <  2:14437/149‑1 (MQ=255)                                                                                                   tttCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGAGGTTgg                                             >  8:161350/1‑149 (MQ=255)                                                                                                    tcaaagctggttacaacgccgccaaactgagcggtggcgtttccagctTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGc                                            >  5:37991‑M2/49‑149 (MQ=255)                                                                                                     tCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGc                                            >  2:268134/1‑148 (MQ=255)                                                                                                       cAGCTGGATACGCCACCGCTCAGTTTTGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCt                                                            <  5:198748/130‑1 (MQ=255)                                                                                                        agctggttacaacgccgccaaactgagcggtggcgtttccagctTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTc                                                           >  7:228914‑M2/45‑130 (MQ=255)                                                                                                        agctggttacaacgccgccaaactgagcggtggcgtttccagctTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTc                                                           <  8:228914‑M2/86‑1 (MQ=255)                                                                                                         GCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCt                                       >  3:2109‑M1/1‑149 (MQ=255)                                                                                                            GGAAACGCCACCGCTCAGTTCGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCTTGt                                    <  3:158379‑M1/149‑1 (MQ=255)                                                                                                                  aacgccgccaaactgagcggtggcgtttccagctTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCTTGTCCTGCg                              <  6:37991‑M2/115‑1 (MQ=255)                                                                                                                    cACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGACCCATCGCGTCGACGACGATCAAGGTCTTTTCATTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCTTGTCCTGCggg                            <  8:214440/149‑1 (MQ=255)                                                                                                                     aCCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCG‑GGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCTTGTCCTGCGGGAt                          >  8:92515/1‑149 (MQ=255)                                                                                                                        gCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATc                                                                                        >  4:179670/1‑85 (MQ=255)                                                                                                                        gCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATc                                                                                        <  3:179670/85‑1 (MQ=255)                                                                                                                        gCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCTTGTCCTGCGGGATGt                        >  1:29100/1‑149 (MQ=255)                                                                                                                            aGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCTTGTCCTGCGGGATGTTCAc                    <  2:29100/149‑1 (MQ=255)                                                                                                                             gTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCTTGTCCTGCGGGATGTTCAcc                   <  1:268134/149‑1 (MQ=255)                                                                                                                                        ttGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCTTGTCCTGCGGGATGTTCACCGCGCCGACGat        <  2:192579/149‑1 (MQ=255)                                                                                                                                        ttGTAACCAGCTTTGACCAGCTAGCGGCAAATGGTGCCGCACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTAAATGCTTGCCCAGCGCGCTAATGCCGGTGGCCAGCTTGTCCTGCGCGAGGTTCACCGCGCcgacga         >  4:182419/1‑148 (MQ=255)                                                                                                                                              ccagctTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCTTGTCCTGCGGGATGTTCACCGCGCCGACGATATGAcc  >  4:123306‑M2/7‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                               TCTCGAGCAGGTACTTGGCGCGCATGCAGTAGGGGCAGTAGTCGCTGGAGTAGACGATGACAGGCTTCATATCACTTCACCAGGGGCAGGTTATCGGCTTTCCAGCTGGAAACGCCACCGCTCAGTTTGGCGGCGTTGTAACCAGCTTTGAGCAGCTCGCGGCAAATGGTGCCGGACTGCTGGCCCATCGCGTCGACGACGATCAAGGTCTTTTCTTTATGCTTGCCCAGCTCGGTCATGCGGTTGGCCAGCTTGTCCTGCGGGATGTTCACCGCGCCGACGATATGACC  >  NC_002947/5760257‑5760546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.