New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5813248	54 (1.280)	4 (0.100)	4/242	NT	7.4%	coding (169/1737 nt)	argS	arginine‑‑tRNA ligase
	?	NC_002947	= 5813287	50 (1.260)					coding (208/1737 nt)	argS	arginine‑‑tRNA ligase

CCTGAAGGGCTGTCGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCTGGCCGACGCCCACCTGGGTGCGCGCAAAGCCGGCCCGG  >  NC_002947/5813146‑5813428                                                                                                                                                |                                                                                                                                              ccTGAAGGGCTGTCGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCtgccggc                                                                                                                                        <  3:32331‑M2/149‑8 (MQ=255)  cTGAAGGGCTGTCGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCtgccggc                                                                                                                                        >  4:73920‑M2/1‑141 (MQ=255)  cTGAAGGGCTGTCGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCtgccggc                                                                                                                                        <  3:73920‑M2/148‑8 (MQ=255)   tGAAGGGCTGTCGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCtgccggc                                                                                                                                        <  5:125925‑M2/147‑8 (MQ=255)   tGAAGGGCTGTCGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCtgccggc                                                                                                                                        <  6:87104‑M2/147‑8 (MQ=255)     aaGGGCTGTCGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCa                                                                                                                                      <  7:9149/147‑1 (MQ=255)        ggCTGTCGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGGCCAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAgcgc                                                                                                                                  <  1:70689/149‑1 (MQ=255)         gCTGTCGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCg                                                                                                                                <  4:32331/149‑1 (MQ=255)             tCGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACAt                                                                                                                            <  5:257843/149‑1 (MQ=255)              cGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACAt                                                                                                                            >  2:214204/1‑148 (MQ=255)               gCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCa                                                                                                                          <  4:109149/149‑1 (MQ=255)                ccGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAg                                                                                                                         >  6:172292/1‑149 (MQ=255)                  ggCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGc                                                                                                                        >  6:231391/1‑148 (MQ=255)                         cAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCga                                                                                                                <  4:49566/149‑1 (MQ=255)                          aGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTc                                                                                                                  >  6:215656/1‑146 (MQ=255)                              ggAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTg                                                                                                           >  6:273322/1‑149 (MQ=255)                                     gCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGccc                                                                                                    >  2:267615/1‑149 (MQ=255)                                       ccGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCCG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTCATCAACGCCCTCCCGGCCAGCGCCGACATCAGCAAGGTCGAGATAGCAGGccc                                                                                                    >  5:35041/1‑147 (MQ=255)                                              aaGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGACCCCGGCTTCCt                                                                                           >  5:105760/1‑149 (MQ=255)                                                gACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCa                                                                                         <  1:267615/149‑1 (MQ=255)                                                  cccACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAAc                                                                                       <  5:231391/149‑1 (MQ=255)                                                   ccACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGccc                                                                                                                                               >  3:29024/1‑92 (MQ=255)                                                   ccACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGccc                                                                                                                                               <  4:29024/92‑1 (MQ=255)                                                   ccACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCa                                                                                                                                      <  5:151766/101‑1 (MQ=255)                                                   ccACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCa                                                                                                                                      >  6:151766/1‑101 (MQ=255)                                                     aCGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CATGGAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAActt                                                                                     >  1:202748/1‑149 (MQ=255)                                                     aCGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAActtc                                                                                    <  5:23197/149‑1 (MQ=255)                                                     aCGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAActt                                                                                     >  6:23197/1‑148 (MQ=255)                                                        gCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACttcttc                                                                                 <  5:172292/149‑1 (MQ=255)                                                          gACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCa                                                                               <  5:215656/149‑1 (MQ=255)                                                             ttggCCAGCATCATGGCGATGTTGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGaa                                                                            >  4:19669/4‑149 (MQ=255)                                                               cGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGaa                                                                            <  1:214204/147‑1 (MQ=255)                                                                gCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAacac                                                                         >  1:60433/1‑149 (MQ=255)                                                                    gCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCAGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGAc                                                                     >  1:208779/1‑149 (MQ=255)                                                                        cATGGCGATGTTGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGccc                                                                 <  3:19669/149‑1 (MQ=255)                                                                            gCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTgg                                                              <  2:60433/148‑1 (MQ=255)                                                                             ccATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGcc                                                            <  3:177116/149‑1 (MQ=255)                                                                                    gCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCTAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCaa                                                                                        >  5:1085/1‑114 (MQ=255)                                                                                    gCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCAAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCaa                                                                                        <  6:1085/114‑1 (MQ=255)                                                                                     cTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCt                                                    <  5:87104/149‑1 (MQ=255)                                                                                       ggCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTg                                                   >  2:72020/1‑148 (MQ=255)                                                                                             gccggccgG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATgccg                                            >  4:38246/1‑149 (MQ=255)                                                                                               cggccgg‑cAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCtgccggccggcttggccagcatcatggcgatgttgctggcgaagtcgccgtgcgtcttgtcccgggcgttttccacctggatcgccggcgacagccctt                                            <  2:202500‑M2/147‑100 (MQ=255)                                                                                                 gccgg‑cAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCtgccggccggcttggccagcatcatggcgatgttgctggcgaagtcgcggtgggtcttgtcccgggcgttttccacctggatcgccggcgacagcccttcagg                                        <  7:154402‑M2/149‑104 (MQ=255)                                                                                                 gccgg‑cAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCt                                        >  4:158432/1‑149 (MQ=255)                                                                                                  ccgg‑cAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGccc                                                                 <  7:211043/123‑1 (MQ=255)                                                                                                  ccgg‑cAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGccc                                                                 >  8:211043/1‑123 (MQ=255)                                                                                                   cgg‑cAT‑GAAGCCGCGCGACCTGGGCGATATACTGATCATCTCCCTGCCGGCGAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAAGACCGACGCCCTGGCCTACCGCCTGGATGCCGCCCTgg                                      <  6:35041/149‑1 (MQ=255)                                                                                                   cgg‑cAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCTgg                                      >  2:136727/1‑149 (MQ=255)                                                                                                           gAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCTGGCCGACg                                >  1:179590/1‑149 (MQ=255)                                                                                                             aGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACttcttc                                                                                 >  7:163863/1‑98 (MQ=255)                                                                                                             aGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACttcttc                                                                                 <  8:163863/98‑1 (MQ=255)                                                                                                              gCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCTGGCCGACGcc                              >  7:229188/1‑148 (MQ=255)                                                                                                                cgcgcgACCTTGCCGAAAAACTGATCAACGCCCtgccgggcggctttgccatgatgattgcgatgttgcttgcgtagtcggcgtgggtcttttccccgggcgttttccacctggatcgccggcgacagcccttcaggcagcacaccgt                            >  1:202500‑M2/1‑33 (MQ=255)                                                                                                                  cgcgACCTCGCCGAAAAACTGATCAACGCCCtgccggccggcttggccagcatcatggcgatgttgctggcgaagtcgccgtgggtcttgtcccgggcgttttccacctggatcgccggcgacagcccttcaggcagcacaccgtcggt                         >  8:154402‑M2/1‑31 (MQ=255)                                                                                                                    cgACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGACCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCTGGCCGACGCCCACCTgg                       <  6:105760/149‑1 (MQ=255)                                                                                                                       ccTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATgccg                                            <  2:194611/125‑1 (MQ=255)                                                                                                                       ccTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATgccg                                            >  1:194611/1‑125 (MQ=255)                                                                                                                           gCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCTGGCCGACGCCCACCTGGGTgcgc                 <  2:202748/148‑1 (MQ=255)                                                                                                                             cGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCTGGCCGACGCCCACCTGGGTgcgcgc               >  3:174408/1‑148 (MQ=255)                                                                                                                                 aaaCTGATCAACGCCCTGCCGGACAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCATCCTCAACTTCATCCAGCACACAGACGCCCTGGCCAACCGCCTGGATGCCGCACTCGCCGACGCCCACCTGGGTGCGCGCAAAGc          >  4:89150/1‑149 (MQ=255)                                                                                                                                       aTCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCTGGCCGACGCCCACCTGGGTGCGCGCAAAGccggcc     <  3:38246/148‑1 (MQ=255)                                                                                                                                       aTCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCTGGCCGACGCCCACCTGGGTGCGCGCAAAGccggc      <  6:125925/147‑1 (MQ=255)                                                                                                                                       aTCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCACAACTACATCCACAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCTGGCCGCCGCCCACCTCGCTGCGCGCAAAGccggccc    >  3:150001/1‑149 (MQ=255)                                                                                                                                         cAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCAACGCCCTGGCCAACCGCCTGGATGCCGCCCTGCCCGACGCCCACCTGGGTGCGCGCAAAGccggcccgg  >  8:201235/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                              CCTGAAGGGCTGTCGCCGGCGATCCAGGTGGAAAACGCCCGGGACAAGACCCACGGCGACTTCGCCAGCAACATCGCCATGATGCTGGCCAAGCCGGCCGG‑CAT‑GAAGCCGCGCGACCTCGCCGAAAAACTGATCAACGCCCTGCCGGCCAGCGCCGACATCAGCAAGGTCGAGATTGCAGGCCCCGGCTTCCTCAACTTCTTCCAGAACACCGACGCCCTGGCCAACCGCCTGGATGCCGCCCTGGCCGACGCCCACCTGGGTGCGCGCAAAGCCGGCCCGG  >  NC_002947/5813146‑5813428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.