New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 428054	40 (1.250)	3 (0.110) +CGCGGCTATCAACCCTTTGATACGAC	3/238	4.0	8.7%	coding (953/957 nt)	PP_0351	transmembrane sensor
	?	NC_002947	3279267 =	37 (1.150)					coding (17/183 nt)	PP_2878	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/427969‑428054 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGCTTTTCTGCGGTGCTGAGAGCTGAAAAGCTTGGTC  >  NC_002947/3279267‑3279305                                                                                       ||||||||||||||||||||||||||                                        aaGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGATGAACGACGGGTGGAGATTGGCCAGAAGGCCCGGCCTCTTCGCGGCTATCAACCCTTTGATACGACCAAGCTTTTCTGCGGTGCTGAGAGCTGAAAAGCTTG     <  7:50564/146‑1   GGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGATGAACGACGGGTGGAGATTGGCCAGAAGGCCCGGCCTCTTCGCGGCTATCAACCCTTTGATACGACCAAGCTTTTCTGCGGTGCTGAGAGCTGAAAAGCTTGGT   <  5:98484/148‑1    GTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGATGAACGACGGGTGGAGATTGGCCAGAAGGCCCGGCCTCTTCGCGGCTATCAACCCTTTGATACGACCAAGCTTTTCTGCGGTGCTGAGAGCTGAAAAGCTTGGTC  <  3:18826/148‑1                                                                                       ||||||||||||||||||||||||||                                        GTGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/427969‑428054 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAGCTTTTCTGCGGTGCTGAGAGCTGAAAAGCTTGGTC  >  NC_002947/3279267‑3279305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.