New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 428054	40 (1.250)	3 (0.110) +CGCGGCTATCAACCCTTTGATACGAC	3/238	4.0	8.7%	coding (953/957 nt)	PP_0351	transmembrane sensor
	?	NC_002947	3279267 =	37 (1.150)					coding (17/183 nt)	PP_2878	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGCACCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCCACCACCGTGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCACGCGCAGGTCGGCGACCTTGGCATCCACCCCGAG  >  NC_002947/427908‑428199                                                                                                                                                   |                                                                                                                                                  cgccccGGCCGCTTCGCGGGTGAACCCGCGCCTACGACGACCCCGAGGTGGGGCCACCCCCGGGGTAGGCGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTAttt                                                                                                                                                  <  5:142499/144‑1 (MQ=14)  gCACCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCCACCACCGTGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTAttt                                                                                                                                                  >  2:155000/1‑147 (MQ=255)     ccGGCGTCTTCGCGGGGGACCCCGCCCCTCCGCCGCCCCCGAGGTGGGGCCCCCCCCGGGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGaa                                                                                                                                              <  5:14544/148‑1 (MQ=17)     ccGGCCTCTTGGGGGGGCAACCCGCGCCTTCGACCCCCCCGTCGGGGGGCCACCACCGGGGTAGGAGCGGGTTTACCCGCTAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGaa                                                                                                                                              <  4:28591/148‑1 (MQ=17)      gggCCTCTTCGCGGGTGAACCCGCTCGTACGACGACCCCGATGTGTGTCCACCACCGTGGTTGGAGGGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAg                                                                                                                                             <  4:43920/147‑1 (MQ=255)        gCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCCACCACCGTGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTg                                                                                                                                           >  6:140847/1‑148 (MQ=255)        gCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCCACCACCGTGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCGGAACGACTGGGGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTg                                                                                                                                           >  3:30776/1‑148 (MQ=255)                gcgGGTGAACCCGCTCCTACGACGACCCCTTTTTGTGTCCACCACCGTGGTTGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTca                                                                                                                                    <  8:66590/147‑1 (MQ=255)                         ccggCTCCTAGGACGCCTCCGATGGGTGTGCACCACCGTGGTTGGAGGGGGTTTACCCGGGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACt                                                                                                                           <  4:138769/144‑1 (MQ=21)                          ccGCGCCTACGACGCCCCCGATGGGTGGCCACCACCGTGGTAGGCGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGGTCACCCACCACTGc                                                                                                                         <  5:120909/148‑1 (MQ=18)                            gCTCCTACGACGACCCCGATGTGTGTCCACCACCGTGGTAGGAGCGGGTTTACCCGGGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGt                                                                                                                       <  3:128124/148‑1 (MQ=255)                              tCCTACGACGACCCCGATGTGTGTCCACCACCGTGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTAt                                                                                                                     <  6:175407/148‑1 (MQ=255)                                cTACGACGACCCCGATGTGTGTCCACCACCGTGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTTACGTTCACCCACCACTGCGTATGc                                                                                                                   >  4:91385/1‑148 (MQ=255)                                                  gtgtCCACCACCGTGGTAGTAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGc                                                                                                 <  8:75104/148‑1 (MQ=255)                                                             cggggTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGGGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCAc                                                                                      <  5:39381/145‑1 (MQ=255)                                                               tGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCa                                                                                    <  3:148709/148‑1 (MQ=255)                                                                 gTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAg                                                                                   >  5:60027/1‑147 (MQ=255)                                                                                 ccGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGt                                                                  >  2:157082/1‑148 (MQ=255)                                                                                   gcgAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCg                                                                <  4:74494/148‑1 (MQ=255)                                                                                     gAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGgt                                                              <  5:130944/148‑1 (MQ=255)                                                                                      aaTACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTACGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGgtg                                                             <  1:37726/148‑1 (MQ=255)                                                                                         aCGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTg                                                          <  6:38416/148‑1 (MQ=255)                                                                                           ggTGGCGGCGGCAACGCTGAAAGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTgg                                                         >  4:55632/1‑147 (MQ=255)                                                                                                cgccggcAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCg                                                   <  3:137206/145‑1 (MQ=255)                                                                                                    ggcAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGATGTTCACCCACCACTGCGTATGCCGCTCGATGTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGaa                                               <  4:109553/148‑1 (MQ=255)                                                                                                      cAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGc                                             <  4:173071/148‑1 (MQ=255)                                                                                                          gCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGcc                                         >  7:93748/1‑148 (MQ=255)                                                                                                                cGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCAc                                   <  3:29777/148‑1 (MQ=255)                                                                                                                 gACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCAcg                                  <  8:86031/148‑1 (MQ=255)                                                                                                                       tggAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTTAGGCCAGCGCCAGGTCGGTTTTGGTCAGCGGTAAGCTGACGGTCACGCGCAg                             <  4:126319/147‑1 (MQ=255)                                                                                                                               ggCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCACGCGCAGGTCGGCGAc                    >  2:83852/1‑148 (MQ=255)                                                                                                                                gCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCCGCGGGAAGCTGCCGGTCACGCGCAGGTCGGCGAcc                   >  2:174940/1‑148 (MQ=255)                                                                                                                                   aGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCACGCGCAGGTCGGCGACCTTg                <  5:140847/148‑1 (MQ=255)                                                                                                                                   aGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCACGCGCAGGTCGGCGACCTTg                <  2:135191/148‑1 (MQ=255)                                                                                                                                        gCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCACGCGCAGGTCGGCGACATTGGCATc           <  6:110291/148‑1 (MQ=255)                                                                                                                                         cccGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCCCGCGCAGGTCGGCGACCTTGGCATcc          >  5:43233/1‑148 (MQ=255)                                                                                                                                                tATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCACGCGCAGGTCGGCGACCTTGGCATCCACCCCGa   >  3:134086/1‑148 (MQ=255)                                                                                                                                                  tttGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCACGCGCAGGTCGGCGACCTTGGCATCCACCCCGAg  >  4:105942/1‑147 (MQ=255)                                                                                                                                                  tttGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCACGCGCAGGTCGGCGACCTTGGCATCCACCCCGAg  >  3:171069/1‑147 (MQ=255)                                                                                                                                                  tttGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCACGCGCAGGTCGGCGACCTTGGCATCCACCCCGAg  >  7:13926/1‑147 (MQ=255)                                                                                                                                                   |                                                                                                                                                  AGCACCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGACCCCGATGTGTGTCCACCACCGTGGTAGGAGCGGGTTTACCCGCGAATACGGTGGCGGCGGCAACGCTGAACGACTGGTGGAGATTGGCCAGCAAGCCCGGCCTATTTGGAAGTGACGTTCACCCACCACTGCGTATGCCGCTCGATCTTGACCGGCAACGCCGGCACCAGTGAGGCCAGCGCCAGGTCGGTGTTGGTCAGCGGGAAGCTGCCGGTCACGCGCAGGTCGGCGACCTTGGCATCCACCCCGAG  >  NC_002947/427908‑428199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.