New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2414487	26 (0.810)	7 (0.360) +GTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATC	7/174	1.6	29.0%	intergenic (+29/‑316)	PP_2114/PP_2115	transposase/hypothetical protein
	?	NC_002947	= 2414569	31 (0.970)					intergenic (+111/‑234)	PP_2114/PP_2115	transposase/hypothetical protein

AAGCCCACGAGGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCT  >  NC_002947/2414344‑2414626                                                                                                                                                |                                                                                                                                            aaGCCCACGAGGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACtgt                                                                                                                                         >  3:76903/1‑148 (MQ=35)      cACGAGGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGcc                                                                                                                                    >  3:123956/1‑148 (MQ=39)         gAGGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCCTGTTTCGACGGATCGGGTCATCAAAGGCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCAcc                                                                                                                                 <  5:64953/148‑1 (MQ=255)            gCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGc                                                                                                                              <  7:142033/148‑1 (MQ=255)                       cTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATa                                                                                                                   >  5:61965/1‑148 (MQ=255)                           aaGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTa                                                                                                               <  7:91389/148‑1 (MQ=255)                                aaGGCCTGGGGGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGTCGTAAGGTCGGAAAGGTGACTGCGCGCCACCTGCGTGAATGAATACCTACTCGa                                                                                                          <  5:72228/148‑1 (MQ=255)                                         gTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGc                                                                                                 <  4:123956/148‑1 (MQ=255)                                             aaGGGACGGCTGTACATGCTCATGTTTCGCCGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCcac                                                                                             >  4:129254/1‑148 (MQ=255)                                             aaGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGACTACCTACTCGATGTGAATGCCcac                                                                                             >  4:114281/1‑148 (MQ=255)                                                    ggCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaag                                                                                      <  7:27847/148‑1 (MQ=255)                                                             tGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGTCTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaagcaagaa                                                                             >  6:106147/1‑148 (MQ=255)                                                                 cATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGAGAATGCCCACATCcaagaagcaagaag                                                                            >  6:36195/1‑145 (MQ=255)                                                                         gACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGAGGTGAATGCCCACATCcaagaagcaagaagcaagaagcaa                                                                  <  4:28756/147‑1 (MQ=255)                                                                          aCGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaagcaagaagcaagaagcaag                                                                 <  2:132409/147‑1 (MQ=255)                                                                           cGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCcaagaagcaagaagcaagaagcaagaa                                                               <  6:69343/148‑1 (MQ=255)                                                                                    tcagcaAAGCCGCCAAAACCAAACGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCg                                                      <  7:51441/148‑1 (MQ=255)                                                                                      atcaAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGACGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACATACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTc                                                    >  5:42556/1‑148 (MQ=255)                                                                                          aaGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGAAAAGGTGAgtcagcgtcgccatcgcaaacggacggttcgctgagtcaaaacagacgagttcgcatcttgcttcttgcttcttgcttcttgcttcttggatg                                                >  3:169840‑M1/1‑55 (MQ=255)                                                                                            gccgccAAAACCAACAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGtttt                                              <  2:138867/148‑1 (MQ=255)                                                                                             ccgccAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGAAAAGGTGAgtcagcgtcgccatcgcaaacggacggttcgctgagtcaaaacagacgagttcgcatcttgcttcttgcttcttgcttcttgcttcttggatgtgg                                             <  2:131963‑M1/148‑97 (MQ=255)                                                                                              cgccAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGa                                            <  2:32452/148‑1 (MQ=255)                                                                                                ccaaaaccaaaaGACCTTGAAAGGGATGGCCGTAAGGGCGAAAAGGTGAgtcagcgtcgccatcgcaaacggacggttcgctgagtcaaaacagacgagttcgcatcttgcttcttgcttcttgcttcttgcttcttggatgtgggca                                          >  1:154185‑M1/1‑49 (MQ=255)                                                                                                  aaaaccaaaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCa                                        >  2:46075/1‑148 (MQ=255)                                                                                                  aaaaccaaaaGACCTTGAAAGGGATGGCCGTAAGGGCGAAAAGGTGAgtcagcgtcgccatcgcaaacggacggttcgctgagtcaaaacagacgagttcgcatcttgcttcttgcttcttgcttcttgcttcttggatgtgggcatt                                        <  5:143801‑M1/148‑102 (MQ=255)                                                                                                       caaaaGACCTTGAAAGGGATGGCCGTAAGGGCGAAAAGGTGAgtcagcgtcgccatcgcaaacggacggttcgctgagtcaaaacagacgagttcgcatcttgcttcttgcttcatgcttcttgcttcttggatgtgggcattcacat                                   >  6:74147‑M1/1‑42 (MQ=255)                                                                                                        aaaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGa                                    >  4:85816/1‑146 (MQ=255)                                                                                                        aaaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGa                                    >  8:135439/1‑146 (MQ=255)                                                                                                         aaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACa                                 <  8:29960/148‑1 (MQ=255)                                                                                                         aaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACa                                 <  6:61965/148‑1 (MQ=255)                                                                                                            gACCTTGAAAGGGATGGCCGTAAGGGCGAAAAGGTGAgtcagcgtcgccatcgcaaacggacggttcgctgagtcaaaacagacgagttcgcatcttgcttcttgcttcttgcgtcttgcttcttggatgtgggcattcacatcgc                                >  7:75261‑M1/1‑37 (MQ=255)                                                                                                             aCCTTGAAAGGGATGGCCGTAAGGGCGAAAAGGTGAgtcagcgtcgccatcgcaaacggacggttcgctgagtcaaaacagacgagttcgcatcttgcttcttgcttcttgcttcttgcttcttggatgtgggcattcacatcgcgta                             <  1:116187‑M1/148‑113 (MQ=255)                                                                                                                  gAAAGGGATGCCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTcg                        >  2:58394/1‑148 (MQ=255)                                                                                                                             ccGTAAGGGCGGAAAGGTGACTATGCGCCCCCTGCGCGAATGACTACCTACGCGATGTGAATGCCCCCATCCAAGAAGCATGCAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgat             <  5:73220‑M2/148‑47 (MQ=255)                                                                                                                             ccGTAAGGGCGGAAAGGTGACTATGCGCCCCCTGCGCGAATGAATACCTACGCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgat             <  1:187385‑M2/148‑47 (MQ=255)                                                                                                                              cGTAAGGGCGGAAAGGTGACTATGCGCCCCCTGCGCGAATGAATACCTACGCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgatg            >  8:7252‑M2/1‑101 (MQ=255)                                                                                                                                      cGGAAAGGTGACTATGCGCCCCCTGCGCGAATGAATACCTACGCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgatggcgacgc     <  5:163565‑M2/147‑55 (MQ=255)                                                                                                                                        gAAAGGTGACTAAGCGCCCCCTGCGCGAATGAATACCTACGCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagagaaccgtccgattgcgatggcgacgctga  <  2:115152‑M2/148‑58 (MQ=255)                                                                                                                                                |                                                                                                                                            AAGCCCACGAGGCCCCAAGGTGCTCAAAGCGAAGGCCTGGGTGCAAGGGACGGCTGTACATGCTCATGTTTCGACGGATCGGGTCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCT  >  NC_002947/2414344‑2414626

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.