| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2414487 | 26 (0.810) | 7 (0.360) +GTCAGCGTCGCCATCGCAAACGGACGGTTCGCTGAGTCAAAACAGACGAGTTCGCATC |
7/174 | 1.6 | 29.0% | intergenic (+29/‑316) | PP_2114/PP_2115 | transposase/hypothetical protein |
| ? | NC_002947 | = 2414569 | 31 (0.970) | intergenic (+111/‑234) | PP_2114/PP_2115 | transposase/hypothetical protein | |||||
TCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGC > NC_002947/2414427‑2414710 | tcagcaAAGCCGCCAAAACCAAACGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCg < 7:51441/148‑1 (MQ=255) atcaAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGACGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACATACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTc > 5:42556/1‑148 (MQ=255) gccgccAAAACCAACAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGtttt < 2:138867/148‑1 (MQ=255) cgccAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGa < 2:32452/148‑1 (MQ=255) aaaaccaaaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCa > 2:46075/1‑148 (MQ=255) aaaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGa > 8:135439/1‑146 (MQ=255) aaaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGa > 4:85816/1‑146 (MQ=255) aaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACa < 8:29960/148‑1 (MQ=255) aaaGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACa < 6:61965/148‑1 (MQ=255) gAAAGGGATGCCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTcg > 2:58394/1‑148 (MQ=255) ccGTAAGGGCGGAAAGGTGACTATGCGCCCCCTGCGCGAATGACTACCTACGCGATGTGAATGCCCCCATCCAAGAAGCATGCAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgat < 5:73220‑M2/148‑47 (MQ=255) ccGTAAGGGCGGAAAGGTGACTATGCGCCCCCTGCGCGAATGAATACCTACGCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgat < 1:187385‑M2/148‑47 (MQ=255) cGTAAGGGCGGAAAGGTGACTATGCGCCCCCTGCGCGAATGAATACCTACGCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgatg > 8:7252‑M2/1‑101 (MQ=255) cGGAAAGGTGACTATGCGCCCCCTGCGCGAATGAATACCTACGCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgatggcgacgc < 5:163565‑M2/147‑55 (MQ=255) gAAAGGTGACTAAGCGCCCCCTGCGCGAATGAATACCTACGCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagagaaccgtccgattgcgatggcgacgctga < 2:115152‑M2/148‑58 (MQ=255) cTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCt < 4:76903/148‑1 (MQ=255) cACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACgg > 1:55328/1‑145 (MQ=255) cACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGa < 5:96442/148‑1 (MQ=255) cACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCAAATCCAACAACCAACAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATACGCGATGCCGCCACTAACTCACCTTTTCGCCCATCCGGCGa > 5:87367/1‑148 (MQ=17) aCCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGc < 2:55328/145‑1 (MQ=255) atgactCCCTACTCGATGTGAATGCCCACATGCAAGAAGCAAGAAGCAAGAAGCCAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGGCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACttttt < 5:36195/147‑1 (MQ=18) ccTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTg > 8:56671/1‑105 (MQ=255) cTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGa < 7:56671/105‑1 (MQ=255) cTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAAcg > 4:174655/1‑147 (MQ=255) tACGCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgatggcgacgctgactcaccttttcgcccttacggccatccctttcaaggt < 1:116187‑M2/148‑95 (MQ=255) aCTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCCAAcgcg > 7:18798/1‑147 (MQ=255) gcgATGTGAATGCCCACATCCAAGAAGCAAGACGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgatggcgacgctgactcaccttttcgcccttacggccatccctttcaaggtc > 7:75261‑M2/2‑51 (MQ=255) aTGTGAATGCCCACATCCAAGAAGCAAGAAGCATGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgatggcgacgctgactcaccttttcgcccttacggccatccctttcaaggtcttttg > 6:74147‑M2/1‑48 (MQ=255) gAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGACCAGTCCATTCGCTATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTa > 8:153756/1‑148 (MQ=255) aaTGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgatggcgacgctgactcaccttttcgcccttacggccatccctttcaaggtcttttggtttt < 5:143801‑M2/148‑106 (MQ=255) tGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgatggcgacgctgactcaccttttcgcccttacggccatccctttcaaggtcttttggttttgg > 1:154185‑M2/1‑41 (MQ=255) ccACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgatggcgacgctgactcaccttttcgcccttacggccatccctttcaaggtcttttggttttggcgg < 2:131963‑M2/148‑111 (MQ=255) ccACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCaa > 8:72932/1‑147 (MQ=255) acaTCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCaaaaa > 7:113399/1‑148 (MQ=255) caTCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAgatgcgaactcgtctgttttgactcagcgaaccgtccgtttgcgatggcgacgctgactcaccttttcgcccttacggccatccctttcaaggtcttttggttttggcggctt > 3:169840‑M2/1‑35 (MQ=255) caTCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCaaaaaa > 4:174380/1‑148 (MQ=255) ccAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGc > 3:101472/1‑148 (MQ=255) caagaagcaagaagcaagaagcaagaagCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCt > 3:145329/1‑148 (MQ=255) aagaagcaagaagcaagaagcaagaagcAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTg > 4:113598/1‑148 (MQ=255) aagaagcaagaagcaagaagcaaATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTACCCAAAAAACGCTGCGCTccc > 8:97212/1‑148 (MQ=255) aagaagcaagaagcaagaagcaaATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTccc < 7:135439/148‑1 (MQ=255) agaagcaaATTCGTCTGTTTTGAATCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTAGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCctg > 3:130462/1‑148 (MQ=255) gaagcaaATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACATTTTCGCCCTTACCGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCctgc > 1:117356/1‑148 (MQ=255) | TCATCAAAGCCGCCAAAACCAAAAGACCTTGAAAGGGATGGCCGTAAGGGCGGAAAGGTGACTGTGCGCCACCTGCGTGAATGAATACCTACTCGATGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAGCAAATTCGTCTGTTTTGACTCAGCGAACAGTCCATTCGCGATGGCGACACTGACTCACCTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGC > NC_002947/2414427‑2414710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |