New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5201567	20 (0.620)	9 (0.290)	9/284	2.4	37.8%	intergenic (‑53/‑127)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	5201666 =	10 (0.320)					intergenic (‑152/‑28)	PP_4582/PP_4583	membrane protein/putative Peptidase

CACATCCAGCCGGTGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCC  >  NC_002947/5201420‑5201709                                                                                                                                                    |                                                                                                                                               cacaTCCAGCCGGTGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGC                                                                                                                                                <  5:26145‑M1/148‑1 (MQ=255)            ggTGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAgtgt                                                                                                                                     <  5:67935/148‑1 (MQ=255)              tGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGttt                                                                                                                                   <  8:140610/148‑1 (MQ=255)                          ccaccaGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGc                                                                                                                       <  1:18809/148‑1 (MQ=255)                          ccaccaGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGc                                                                                                                       >  4:67081/1‑148 (MQ=255)                            accaGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCtgtg                                                                                                                            >  4:146363/1‑141 (MQ=255)                            accaGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCct                                                                                                                     >  2:29944/1‑148 (MQ=255)                             ccaGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGc                                                                                                                           <  3:146363/141‑1 (MQ=255)                                  agGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTAATcgc                                                                                                               >  1:65810/1‑148 (MQ=255)                                       cccTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGt                                                                                                           >  4:106415/1‑147 (MQ=255)                                                 gcTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTTTACCCGcgaa                                                                                                <  7:74/148‑4 (MQ=255)                                                          tACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGt                                                                                       <  7:29837/148‑1 (MQ=255)                                                           aCAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTg                                                                                      >  5:171983/1‑148 (MQ=255)                                                              aGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCacaggcaactccaatcaagagaccttcaatgccaaccaagccccaacccccgattgcccaa                                                                                   <  3:67081‑M1/148‑62 (MQ=255)                                                                      gCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCGCCTACCTCGGTGCGATCCCTGtt                                                                           >  3:51262/1‑148 (MQ=255)                                                                             ggtAGTCGTTCTCGGGCCTGGTGTGCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCGCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCgg                                                                    <  5:166371/147‑1 (MQ=255)                                                                                aGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCacaggcaactccaatcaagagaccttcaatgccaaccaagccccaacccccgattgcccaagccgaccaggccaccgac                                                                 <  4:7712‑M1/148‑80 (MQ=255)                                                                                 gTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTTAACCCCCGCCGACCAGGGGGGGCTGCCAGTTGGGGCggggt                                                                 >  2:44789/1‑145 (MQ=255)                                                                                             cATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCacaggcaactccaatcaagagaccttcaatgccaaccaagccccaacccccgattgcccaagccgaccaggccaccgacccgtatgcctggc                                                    <  4:82289‑M1/148‑93 (MQ=255)                                                                                                 gtgtTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAAACCGCGACTAACTAGGTGCGATACCGGTTGGAGCGGGTTTTCCCCCGAAGAGGCCg                                                >  2:4011/1‑148 (MQ=255)                                                                                                       gTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGCTCCCGGTTGGAGCGGGTTTACCCGCGCAGAGGCCGGCCCAg                                          >  7:88839/1‑148 (MQ=255)                                                                                                        tGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCGACCTCGGTGCGGTGCCTGTTGGCGCGGGTTTACCCGCGCAGAGGGCGGGCCAgg                                         >  6:156131/1‑148 (MQ=38)                                                                                                          cAAGCCAGGCAAAGAGATGCCTATTAGAAACACTTTTCCGGGCacaggcaactccaatcaagagaccttcaatgccaaccaagccccaacccccgattgcccaagccgaccaggccaccgacccgtatgcctggctgcaacagcgcga                                       <  7:105905‑M1/148‑106 (MQ=255)                                                                                                                   cAAAGAGATGCCTATGATACACCCATTTCCGGGCacaggcaactccaatcaagagaccttcaatgccaaccaagccccaacccccgattgcccaagccgaccaggccaccgacccgtatgcctggctgcaacagcgcgacacccccga                              <  5:156131‑M1/148‑115 (MQ=255)                                                                                                                       gagaGGCCTATGATAAACACTTTTCCGGGCacaggcaactccaatcaagagaccttcaatgccaaccaagccccaacccccgattgcccaagccgaccaggccaccgacccgtatgcctggctgcaacagcgcgacacccccgaggta                          <  7:92035‑M1/148‑119 (MQ=255)                                                                                                                        agaTGCCTATGATAAACACTTTTCCGGGCacaggcaactccaatcaagagaccttcaatgccaaccaagccccaacccccgattgcccaagccgaccaggccaccgacccgtatgcctggctgcaacagcgcgacacccccgaggtac                         <  1:4011‑M1/148‑120 (MQ=255)                                                                                                                           tGCCTATGATAAACACTTTTCCGGGCacaggcaactccaatcaagagaccttcaatgccaaccaagcccccacccccgattgcccaagccgaccaggccaccgacccgtatgcctggctgcaacagcgcgacacccccgaggtactcg                      <  5:94249‑M1/148‑123 (MQ=255)                                                                                                                               tATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTTAACCCGCGCCAACCTCGGGGGGCTCCCGGTTGGAGCGGGTTTACCCGCGCACAGGCCGGGACAGGCCCCGCCCATCAAGAGAccgt                    >  8:44204/1‑144 (MQ=25)                                                                                                                                           ttttCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACTACAATCAAGAGACCGTCAATGCCAACCAAg      >  4:20098/1‑148 (MQ=37)                                                                                                                                                cGGGCacaggcaactccaatcaagagaccttcaatgccaaccaagccccaacccccgattgccaaagccgaccaggacaccgacccgtatgcctggctgcaacagcgcgacacccccgaggtactcgcttacatgcaagctgaaaac  <  1:45634‑M1/147‑143 (MQ=255)                                                                                                                                                    |                                                                                                                                               CACATCCAGCCGGTGAGCTTGAAGCCCACCAGCAGGCACCCTAAGGCGGCTACTGCGTACAAGCCCCAGGCGAAGGTGTAGTCGTTCTCGGTCATGGTGTTCGTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCC  >  NC_002947/5201420‑5201709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.