New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5201567	20 (0.620)	9 (0.290)	9/284	2.4	37.8%	intergenic (‑53/‑127)	PP_4582/PP_4583	membrane protein/putative Peptidase
	?	NC_002947	5201666 =	10 (0.320)					intergenic (‑152/‑28)	PP_4582/PP_4583	membrane protein/putative Peptidase

GTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAAC  >  NC_002947/5201522‑5201807                                                                                                                                                 |                                                                                                                                              gTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGCTCCCGGTTGGAGCGGGTTTACCCGCGCAGAGGCCGGCCCAg                                                                                                                                            >  7:88839/1‑148 (MQ=255)  tGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCGACCTCGGTGCGGTGCCTGTTGGCGCGGGTTTACCCGCGCAGAGGGCGGGCCAgg                                                                                                                                           >  6:156131/1‑148 (MQ=38)                         tATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTTAACCCGCGCCAACCTCGGGGGGCTCCCGGTTGGAGCGGGTTTACCCGCGCACAGGCCGGGACAGGCCCCGCCCATCAAGAGAccgt                                                                                                                      >  8:44204/1‑144 (MQ=25)                                     ttttCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAACGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACTACAATCAAGAGACCGTCAATGCCAACCAAg                                                                                                        >  4:20098/1‑148 (MQ=37)                                                     aGTGTTTGCCTGTGCCGGCCTCTTAGCGGGTAAAACCGCGCCAAACAAGGTGCGATCCCTGTTGGAGCGGGGTTACCCGCGAAGAGGGCGGCACAGGCAACGCCCATAAAGAGCCCGTAAATGCCAACCaacccccaaccccccaatg                                                                                        >  2:37009/1‑143 (MQ=255)                                                          agccccaggcgaaggtgtagtcgttctcggtcatggtgttcgtgcaagccaggcaaagagatgcctatgataaacacttttccgggcACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCaa                                                                                   <  3:67081‑M2/61‑1 (MQ=255)                                                                            agtcgttctcggtcatggtgttcgtgcaagccaggcaaagagatgcctatgataaacacttttccgggcACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGAc                                                                 <  4:7712‑M2/79‑1 (MQ=255)                                                                                         catggtgttcgtgcaagccaggcaaagagatgcctatgataaacacttttccgggcACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGc                                                    <  4:82289‑M2/92‑1 (MQ=255)                                                                                              cTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCaa                                               >  7:91073/1‑148 (MQ=255)                                                                                                      caagccaggcaaagagatgcctattagaaacacttttccgggcACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGa                                       <  7:105905‑M2/105‑1 (MQ=255)                                                                                                            tCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCCACCAGGCCACCGACCCGTATGCCTGGCTGCCACAGCGCGCcccccc                                 >  4:463/1‑148 (MQ=255)                                                                                                             cccTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGCCAcccc                                 >  8:121858/1‑147 (MQ=255)                                                                                                              ccTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGACTGCAACAGCGCGCCAcccc                                 >  6:89599/1‑146 (MQ=255)                                                                                                               caaagagatgcctatgatacacccatttccgggcACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGa                              <  5:156131‑M2/114‑1 (MQ=255)                                                                                                                tGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAg                             >  4:84627/1‑148 (MQ=255)                                                                                                                   gagaggcctatgataaacacttttccgggcACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTa                          <  7:92035‑M2/118‑1 (MQ=255)                                                                                                                    agatgcctatgataaacacttttccgggcACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTAc                         <  1:4011‑M2/119‑1 (MQ=255)                                                                                                                       tgcctatgataaacacttttccgggcACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCCACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCg                      <  5:94249‑M2/122‑1 (MQ=255)                                                                                                                                            cgggcACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCAAAGCCGACCAGGACACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACATGCAAGCTGAAAAc  <  1:45634‑M2/142‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                              GTGCAAGCCAGGCAAAGAGATGCCTATGATAAACACTTTTCCGGGCGCAGACAGTGTTTGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCTCGGTGCGATCCCTGTTGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACTCCAATCAAGAGACCTTCAATGCCAACCAAGCCCCAACCCCCGATTGCCCAAGCCGACCAGGCCACCGACCCGTATGCCTGGCTGCAACAGCGCGACACCCCCGAGGTACTCGCTTACCTGCAAGCTGAAAAC  >  NC_002947/5201522‑5201807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.