| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 71964 = | 59 (1.200) | 3 (0.060) | 3/248 | NT | 5.3% | coding (885/948 nt) | glyQ | glycine‑tRNA ligase subunit alpha |
| ? | NC_002947 | 72012 = | 50 (1.050) | coding (837/948 nt) | glyQ | glycine‑tRNA ligase subunit alpha | |||||
AAGGCATCGCATACCTTCAACCTGCTGGACGCCCGCCGCGCCATCTCGGTAACCGAGCGCCAGCGTTACATCCTGCGTGTACGTACCCTGGCCCGGGACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/72101‑71964‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcCAGGGTACGTACACGCAGGATGTAACGCTGGCGCTCGGTTACCGAGATGGCGCGGCGGGCGTCCAGCAGGTTGAAGGTATGCGATGCCTTCAGGACCATTTCATAGGTCGGCAGCGGCAGCTCCAGCTTGATCAGGCGGTTGGCT > NC_002947/72012‑72156 AAGGCATCGCATACCTTCAACCTGCTGGACGCCCGCCGCGCCATCTCGGTAACCGAGCGCCAGCGTTACATCCTGCGTGTACGTACCCTGGCCCGGGACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTG > 1:32618/1‑135AAGGCATCGCATACCTTCAACCTGCTGGACGCCCGCCGCGCCATCTCGGTAACCGAGCGCCAGCGTTACATCCTGCGTGTACGTACCCTGGCCCGGGACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTG < 2:32618/135‑1 CATACCTTCAACCTGCTGGACGCCCGCCGCGCCATCTCGGTAACCGAGCGCCAGCGTTACATCCTGCGTGTACGTACCCTGGCCCGGGACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGG < 1:282578/127‑1 CATACCTTCAACCTGCTGGACGCCCGCCGCGCCATCTCGGTAACCGAGCGCCAGCGTTACATCCTGCGTGTACGTACCCTGGCCCGGGACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGG > 2:282578/1‑127 TGCTGGACGCCCGCCGCGCCATCTCGGTAACCGAGCGCCAGCGTTACATCCTGCGTGTACGTACCCTGGCCCGGGACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGG < 1:122543/114‑1 TGCTGGACGCCCGCCGCGCCATCTCGGTAACCGAGCGCCAGCGTTACATCCTGCGTGTACGTACCCTGGCCCGGGACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGACTGG > 2:122543/1‑114 CCGGGACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGGGCCAGGGTACGTACACGCAGGATGTAACGCTGGCGCTCGGTTACCGAGATGGCGCGGCGGGCGTCCAGCAGGTTGAAGGTATGCGATGCCTTCA > 1:279007/1‑138 CCGGGACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGGGCCAGGGTACGTACACGCAGGATGTAACGCTGGCGCTCGGTTACCGAGATGGCGCGGCGGGCGTCCAGCAGGTTGAAGGTATGCGATGCCTTCA < 2:279007/138‑1 ACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGGGCCAGGGTACGTACACGCAGGATGTAACGCTGGCGCTCGGTTACCGAGATGGCGCGGCGGGCGTCCAGCAGGTTGAAGGTTTGCGATGCCTTCAGGACCATTTCATAGGT < 2:61188/149‑1 GGGCCAGGGTACGTACACGCAGGATGTAACGCTGGCGCTCGGTTACCGAGATGGCGCGGCGGGCGTCCAGCAGGTTGAAGGTATGCGATGCCTTCAGGACCATTTCATAGGTCGGCAGCGGCAGCTCCAGCTTGATCAGGCGGTTGGCT < 1:204967/149‑1 AAGGCATCGCATACCTTCAACCTGCTGGACGCCCGCCGCGCCATCTCGGTAACCGAGCGCCAGCGTTACATCCTGCGTGTACGTACCCTGGCCCGGGACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/72101‑71964‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcCAGGGTACGTACACGCAGGATGTAACGCTGGCGCTCGGTTACCGAGATGGCGCGGCGGGCGTCCAGCAGGTTGAAGGTATGCGATGCCTTCAGGACCATTTCATAGGTCGGCAGCGGCAGCTCCAGCTTGATCAGGCGGTTGGCT > NC_002947/72012‑72156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |