New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 422593	45 (0.910)	3 (0.060)	3/240	NT	6.2%	coding (1355/2787 nt)	PP_0348	hypothetical protein
	?	NC_002947	= 422635	49 (1.060)					coding (1313/2787 nt)	PP_0348	hypothetical protein

GTTGGTCCAACACTGCGCGCACCCAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/422438‑422593 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaactgaACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAGTTCCAGAGCAGGCAAATGGCGCCTGACTGCGCACAGCAAGGTCAACCGTGCACGCATGCACGCTGAAGCAGTCAAGGCGCGCTACGCCGGACACTTTGGC  <  NC_002947/422635‑422490                                                                                                                                                                                                                                                                                                                GTTGGTCCAACACTGCGCGCACCCAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTG                                                                                                                                                           <  7:276478/149‑1     GTCCAACACTGCGCGCACCCAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAAC                                                                                                                                                       <  3:37155/149‑1      TCCAACACTGCGCGCACCCAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTATGGAACT                                                                                                                                                      >  6:288094/1‑149              TGCGCGAAGCCTGTTGTAGCCATGTTAGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCTCCTTGACTGCTTCAGCGTGCATGCTTGCAGGGTTGACCTTTCTGTGCTCAGTCAGTCGCGATTTGCCTGCTCTGGAACTtatgg                                                                                                                                                 <  5:306992/146‑6                                                         AAGTGTCCGGCGTATCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGAACGTGGGGGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAGTTC                                                                                                   <  8:208509/149‑1                                                                 GGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAG                                                                                                      >  1:311876/1‑138                                                                 GGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAG                                                                                                      <  2:311876/138‑1                                                                                                                                                        ACTGAACGTGGGTGACAGCTACTCAAAGTACCTGCACACCCAACTCATCAGTTCCAGAGCAGGCAAATGGCGCCTGACTGCGCACAGCAAGGTCAACCGTGCACGCATGCACGCTGAAGCAGTCAAGGCGCGCTACGCCGGACACTTTG    <  8:285705/149‑1                                                                                                                                                        ACTGAACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAGTTCCAGAGCAGGCAAATGGCGCCTGACTGCGCACAGCAAGGTCAACCGTGCACGCATGCACGCTGAAGCAGTCAAGGCGCGCTACGCCGGACACTTTG    <  5:156643/149‑1                                                                                                                                                            AACGTGGGTGACAGCTTCGCAAAGTACCTGCACACCCAACTCATCAGTTCCAGAGCAGGCAAATGGCGCCTGACTGCGCACAGCAAGGTCAACCGTGCACGCATGCACGCTGTAGCAGTCAAGGCGCGCTACGGCGGACACTTTGGC  <  3:64009/147‑1                                                                                                                                                                                                                                                                                                                GTTGGTCCAACACTGCGCGCACCCAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/422438‑422593 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaactgaACGTGGGTGACAGCTACGCAAAGTACCTGCACACCCAACTCATCAGTTCCAGAGCAGGCAAATGGCGCCTGACTGCGCACAGCAAGGTCAACCGTGCACGCATGCACGCTGAAGCAGTCAAGGCGCGCTACGCCGGACACTTTGGC  <  NC_002947/422635‑422490

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.