New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 422593	45 (0.910)	3 (0.060)	3/240	NT	6.2%	coding (1355/2787 nt)	PP_0348	hypothetical protein
	?	NC_002947	= 422635	49 (1.060)					coding (1313/2787 nt)	PP_0348	hypothetical protein

ACTGCGCGCACCCAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATC  >  NC_002947/422449‑422738                                                                                                                                                  |                                                                                                                                                   acTGCGCGCACCCAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAg                                                                                                                                                >  2:87596/1‑149 (MQ=255)   tGCGCGCACCCAGTAGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTCACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCTCCATTTGCCTGCTCTGGAACtg‑atgg                                                                                                                                                 >  6:306992/1‑145 (MQ=255)     cgcgcACCCAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTgg                                                                                                                                            <  6:156645/149‑1 (MQ=255)     cgcgcACCCAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTgg                                                                                                                                            <  3:45470/149‑1 (MQ=255)       cgcACCGAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGAGTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGgt                                                                                                                                          <  4:301652/149‑1 (MQ=255)           cccAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGc                                                                                                                                      <  3:211728/149‑1 (MQ=255)           cccAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGc                                                                                                                                      <  5:89633/149‑1 (MQ=255)            ccAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACtg‑at                                                                                                                                                   <  3:160696/135‑1 (MQ=255)            ccAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACtg‑at                                                                                                                                                   >  4:160696/1‑135 (MQ=255)                      ccATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCGGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGc                                                                                                                          >  2:252163/1‑149 (MQ=255)                       cATGTTAGTAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGTCCTTGCTGTGCGCAGTCATGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGc                                                                                                                          <  5:288094/148‑1 (MQ=255)                         tGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGtt                                                                                                                                              >  7:283664/1‑127 (MQ=255)                         tGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGtt                                                                                                                                              <  8:283664/127‑1 (MQ=255)                           ttCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAg                                                                                                                      <  3:80799/148‑1 (MQ=255)                               aaaaGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTc                                                                                                                 <  1:87596/149‑1 (MQ=255)                                  aGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTTCACGGTTTACC‑TGCTGTGCGCAGTCAGGCGCCATTTTCCTGCTCTGTAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCAccc                                                                                                             <  1:51138/149‑1 (MQ=255)                                      cTTCGCCAAAGTGTCCGGCGTAGCGCGCCGTGACTGCTTCTGCGTGCATGCGTGCACGGGTGACGTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGGGTGCAG‑GTACTTTGCGTAGCTGTCACCCACg                                                                                                          <  7:236105/149‑1 (MQ=255)                                       ttCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGt                                                                                                         >  8:62990/1‑149 (MQ=255)                                          gCCAAAGTGTCCGCCGTAGCGCGCCTTGACTGCTACAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGAAGCTGTCACCCACGTt                                                                                                        <  3:64009‑M2/147‑2 (MQ=255)                                            cAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTtcagt                                                                                                    <  5:156643‑M2/149‑6 (MQ=255)                                            cAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGAGTAGCTGTCACCCACGTtcagt                                                                                                    <  8:285705‑M2/149‑6 (MQ=255)                                              aaGTGTCCGGCGTATCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑Aacgtgggggacagctacgcaaagtacctgcacacccaactcatcagttc                                                                                                   <  8:208509‑M1/149‑50 (MQ=255)                                                      ggCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑Aacgtgggtgacagctacgcaaagtacctgcacacccaactcatcag                                                                                                      <  2:311876‑M1/138‑47 (MQ=255)                                                      ggCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑Aacgtgggtgacagctacgcaaagtacctgcacacccaactcatcag                                                                                                      >  1:311876‑M1/1‑92 (MQ=255)                                                              gcgcCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACATTCAGTTCCCGGACCATGTGCTTg                                                                                  <  7:45498/149‑1 (MQ=255)                                                                gcCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACtg‑atga                                                                                                                                                 >  1:58852/1‑85 (MQ=255)                                                                gcCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACtg‑atga                                                                                                                                                 <  2:58852/85‑1 (MQ=255)                                                                gcCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCt                                                                                                                    <  6:96272/113‑1 (MQ=255)                                                                gcCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCt                                                                                                                    >  5:96272/1‑113 (MQ=255)                                                                       cTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAGCGTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCg                                                                                               <  1:211446/128‑1 (MQ=255)                                                                       cTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCg                                                                                               >  2:211446/1‑127 (MQ=255)                                                                             cAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGt                                                                    <  7:62990/148‑1 (MQ=255)                                                                               gCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAg                                                                 >  8:231995/1‑149 (MQ=255)                                                                                     aTGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTgcggc                                                                      >  8:145246/1‑138 (MQ=255)                                                                                     aTGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTgcggc                                                                      <  7:145246/138‑1 (MQ=255)                                                                                           gCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCAt                                                     >  1:247816/1‑149 (MQ=255)                                                                                            cACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATg                                                    >  6:205070/1‑149 (MQ=255)                                                                                               ggTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCt                                                 >  4:97944/1‑149 (MQ=255)                                                                                                gTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCtt                                                >  8:147224/1‑149 (MQ=255)                                                                                                 ttGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCttt                                               <  7:108178/149‑1 (MQ=255)                                                                                                    aCCTTGCTGTGCGCCGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGc                                             <  1:252163/148‑1 (MQ=255)                                                                                                    aCCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGc                                             <  4:10052/148‑1 (MQ=255)                                                                                                    aCCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTCGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGc                                             <  4:5574/148‑1 (MQ=255)                                                                                                      cTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTGAATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCg                                           >  1:224322/1‑149 (MQ=255)                                                                                                      cTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGt                                          >  3:175968/1‑149 (MQ=255)                                                                                                          cTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTggg                                       >  5:141876/1‑148 (MQ=255)                                                                                                          cTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTCGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTggg                                       <  6:156643/148‑1 (MQ=255)                                                                                                             tgCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATg                                   <  7:147224/149‑1 (MQ=255)                                                                                                               agcAGTCAGGCGCCATTTGCCTGCTCTGGACCTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGa                                 <  3:190879/148‑1 (MQ=255)                                                                                                                   gTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCAc                             >  7:109072/1‑149 (MQ=255)                                                                                                                            cATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGt                    <  7:231995/149‑1 (MQ=255)                                                                                                                             aTTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTc                   <  8:109072/149‑1 (MQ=255)                                                                                                                                tGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAg                 <  5:228461/148‑1 (MQ=255)                                                                                                                                 gCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCACGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGc                <  3:164026/148‑1 (MQ=255)                                                                                                                                  ccTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCa              <  3:97944/149‑1 (MQ=255)                                                                                                                                     gCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCag             >  6:30289/1‑147 (MQ=255)                                                                                                                                         ttgatcTG‑ATGAGTTGGGTGTGCTG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCTGACCATGTGCTTGTCATAGTGGGGGGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCTTGGATCACCCGGGCAGTCAGCCAGTAGTCg       <  4:64009/144‑1 (MQ=255)                                                                                                                                          ggAACTG‑ATGAGTTGGGTGTGGAG‑GTACTTTGCGTAGCTGTCAGCCACGTTCAGTTGCCGGACATTGTGCTTGAGATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGTTCACCCGGGCAGTCAGCGAGTAGTCgg      >  7:266579/1‑149 (MQ=255)                                                                                                                                           gtaCTG‑ATGAGTTTGGTGTTGAT‑GTACTTTGCGTAGGTGTCAGCCAGGTTCTGTTCCCGGTCCATGTGCTTGACATTCTGCGGCGTGAGCCCGGCGGTGATGGATTTGTCGTGGGAATTGATCACCGGGTCAGTGATCCAGTAGTAgg      <  2:247816/146‑1 (MQ=255)                                                                                                                                           gAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCCCCCACGTtcagttccagagcaggcaaatggcgcctgactgcgcacagcaaggtcaaccgtgcacgcatgcacgctgaagcagtcaaggcgcgatacgccggacactt     <  8:208509‑M2/149‑101 (MQ=255)                                                                                                                                             aCTG‑Aacgtgggtgacagctactcaaagtacctgcacacccaactcatcagttccagagcaggcaaatggcgcctgactgcgcacagcaaggtcaaccgtgcacgcatgcacgctgaagcagtcaaggcgcgctacgccggacactttg    <  8:285705‑M1/149‑145 (MQ=255)                                                                                                                                             aCTG‑Aacgtgggtgacagctacgcaaagtacctgcacacccaactcatcagttccagagcaggcaaatggcgcctgactgcgcacagcaaggtcaaccgtgcacgcatgcacgctgaagcagtcaaggcgcgctacgccggacactttg    <  5:156643‑M1/149‑145 (MQ=255)                                                                                                                                              cTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTtcagttccagagcaggcaaatggcgcctgactgcgcacagcaaggtcaaccgtgcacgcatgcacgctgaagcagtcaaggcgcgctacgcc             <  2:311876‑M2/138‑93 (MQ=255)                                                                                                                                              cTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTtcagttccagagcaggcaaatggcgcctgactgcgcacagcaaggtcaaccgtgcacgcatgcacgctgaagcagtcaaggcgcgctacgcc             >  1:311876‑M2/1‑46 (MQ=255)                                                                                                                                                  aacgtgggtgacagcttcgcaaagtacctgcacacccaactcatcagttccagagcaggcaaatggcgcctgactgcgcacagcaaggtcaaccgtgcacgcatgcacgctgtagcagtcaaggcgcgctacggcggacactttggc  <  3:64009‑M1/147‑147 (MQ=255)                                                                                                                                                  |                                                                                                                                                   ACTGCGCGCACCCAGTTGTAGCCATGTTCGAAAAGGTCTTCGCCAAAGTGTCCGGCGTAGCGCGCCTTGACTGCTTCAGCGTGCATGCGTGCACGGTTGACCTTGCTGTGCGCAGTCAGGCGCCATTTGCCTGCTCTGGAACTG‑ATGAGTTGGGTGTGCAG‑GTACTTTGCGTAGCTGTCACCCACGTTCAGTTCCCGGACCATGTGCTTGACATACTGCGGCGTGAGCCCGGCGGGCATGGCTTTGCCGTGGGCATGGATCACCCGGGCAGTCAGCCAGTAGTCGGTATC  >  NC_002947/422449‑422738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.