| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 636964 | 63 (1.280) | 4 (0.080) | 4/248 | NT | 6.1% | coding (1188/1350 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
| ? | NC_002947 | = 636999 | 63 (1.320) | coding (1223/1350 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase | |||||
GGGTGGGGGAGGCGCCTGTGATCGCGGTGATCGAGCCACGCTCCAACTCGATGAAGCTCGGCGCCCATCGTGACGGCCTGCCAGAAAGCGTCAACGACGCTGACCAGGTGATCTGGTATGCGCCGGCCAACCTCGGCTGGGACCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/636816‑636964‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACCACGCTCGGCACCTTGCACTGCGCAGCGGTGGCGGCCAGGTCCCAGCCGAGGTTGGCCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGCGTG < NC_002947/636999‑636852 GGGTGGGGGAGGCGCCTGTGATCGCGGTGATCGAGCCACGCTCCAACTCGATGAAGCTCGGCGCCCATCGTGACGGCCTGCCAGAAAGCGTCAACGACGCTGACCAGGTGATCTGGTATGCGCCGGCCAACCTCGGCTGGGACCTGGCC > 2:53628/1‑149 AGCCACGCTCCAACTCGATGAAGCTCGGCGCCCATCGTGACGGCCTGCCAGAAAGCGTCAACGACGCTGACCAGGTGATCTGGTATGCGCCGGCCAACCTCGGCTGGGACCTGGCCACCACGCTCGGCACCTTGCACTGCGCAGCGGTG < 7:128616/149‑1 cCGCTCCACCTCGATGAAGCTCTGCGCCCATCGTGACGGCCTGCCAGAAAGCGTCAACGACGCTGACCAGGTGATCTGGTATGCGCCGGCCAACCTCGGCTGGGCCCTGGCCACCACGCTCGGCACCTTGCACTGCGCAGCGGTGGCGG < 6:197936/148‑1 GCTCGGCGCCCATCGTGACGGCCTGCCAGAAAGCGTCAACGACGCTGACCAGGTGATCTGGTATGCGCCGGCCAACCTCGGCTGGGACCTGGCCACCACGCTCGGCACCTTGCACTGCGCAGCGGTGGCGGCCA > 3:124032/1‑134 GCTCGGCGCCCATCGTGACGGCCTGCCAGAAAGCGTCAACGACGCTGACCAGGTGATCTGGTATGCGCCGGCCAACCTCGGCTGGGACCTGGCCACCACGCTCGGCACCTTGCACTGCGCAGCGGTGGCGGCCA < 4:124032/134‑1 CACCACGCTCGGCACCTTGCACTGCGCAGCGGTGGCGGCCAGGTCCCAGCCGAGGTTGGCCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTTGAGC < 3:26339/146‑1 CACCACGCTCGGCACCTTGCACTGCGCAGCGGTGGCGGCCAGGTCCCAGCCGAGGTTGGCCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGCGTG > 5:308606/1‑149 CACCACGCTCGGCACCTTGCACTGCGCAGCGGTGGCGGCCAGGTCCCAGCCGAGGTTGGCCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGC > 4:26339/1‑146 CACCACGCTCGGCACCTTGCACTGCGCAGCGGTGGCGGCCAGGTCCCAGCCGAGGTTGGCCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCA < 5:124772/107‑1 CACCACGCTCGGCACCTTGCACTGCGCAGCGGTGGCGGCCAGGTCCCAGCCGAGGTTGGCCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCA > 6:124772/1‑107 CACCACGCTCGGCACCTTGCACTGCGCAGCGGTGGCGGCCAGGTCCCAGCCGAGGTTGGCCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGATTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGCGTG > 6:259385/1‑149 GGGTGGGGGAGGCGCCTGTGATCGCGGTGATCGAGCCACGCTCCAACTCGATGAAGCTCGGCGCCCATCGTGACGGCCTGCCAGAAAGCGTCAACGACGCTGACCAGGTGATCTGGTATGCGCCGGCCAACCTCGGCTGGGACCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/636816‑636964‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACCACGCTCGGCACCTTGCACTGCGCAGCGGTGGCGGCCAGGTCCCAGCCGAGGTTGGCCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGCGTG < NC_002947/636999‑636852 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |