New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	822269 =	59 (1.200)	3 (0.060)	3/244	NT	5.8%	coding (1640/2412 nt)	PP_0707	hypothetical protein
	?	NC_002947	822299 =	42 (0.890)					coding (1670/2412 nt)	PP_0707	hypothetical protein

ACACGGATGGCGAACAGGCCACCGAGGAAGATCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/822305‑822269 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccaTCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCGGCATGCGGGCCTCGCTGGTGACCCTGGTGGGTTACCTGGGTTTCCTGTTCCTGGCCATGTTGGTGATGTCGACCTTGCGTATCAAC  >  NC_002947/822299‑822444                                                                                                                                                                                         ACACGGATGGCGAACAGGCCACCGAGGAAGATCGCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCGGCATGCGGGCCTCGCTGGTGACCCTGGTGGGTTACCTGGGTTTCCTGTTCCT                                    >  8:179105/1‑149       ATGGCGAACAGGCCACCGAGGAAGATCGCCATCCGTGTGGTCAAGCGCTGGTTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCGGCATGCGGGCCTCGCTGGTGACCCTGGT                                                            <  5:321677/119‑1       ATGGCGAACAGGCCACCGAGGAAGATCGCCATCCGTGTGGTCAAGCGCTGGTTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCGGCATGCGGGCCTCGCTGGTGACCCTGGT                                                            >  6:321677/1‑119                                  GCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCGTCATGCGGGCCTCGCTGGTGACACTGGTGGGTTACCTGGGTTTCCTGTTCCTGGCCATGTTGGTGATGTCGACCTTGCGTATCA    >  8:235732/1‑148                                  GCCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCGGCATGCGGGCCTCGCTGGTGACCCTGGTGGGTGACCTGGGTTTGCTGTTGCTGGCGATGTTGGTGATGTGGACCTTGCGTATCAt   >  8:249925/1‑148                                   CCATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCGGCATGCGGGCCTCGCTGGTGACCCTGGTGGGTTACCTGGGTTTCCTGTTCCTGGCCATGTTGCTGATTTAGAACTTGCGTATCAca  >  6:222973/1‑147                                    CATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCT                                                                                                                  <  1:82363/36‑1                                    CATCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCT                                                                                                                  >  2:82363/1‑36                                                                                                                                                                                         ACACGGATGGCGAACAGGCCACCGAGGAAGATCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/822305‑822269 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccaTCCGTGTGGTCAAGCGCTGGCTGAGCGACCGCCTGCTGCCGGAAACCGAGATGGACGCCGGCATGCGGGCCTCGCTGGTGACCCTGGTGGGTTACCTGGGTTTCCTGTTCCTGGCCATGTTGGTGATGTCGACCTTGCGTATCAAC  >  NC_002947/822299‑822444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.