New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 885714 | 64 (1.300) | 5 (0.110) | 5/244 | NT | 7.4% | coding (1625/2718 nt) | PP_0767 | LuxR family transcriptional regulator |
? | NC_002947 | = 885737 | 64 (1.360) | coding (1648/2718 nt) | PP_0767 | LuxR family transcriptional regulator |
GCCTATTGCGGCGAAGCGCTGCAGAGCCTGCCGAGCA‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/885563‑885714 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgCCTCGAACAAGGGGTTACCGACCCGCTGGGCCAGCTCCAGGGCCTCGCGGTTCCAGCCTCGGGCCCGCCAGAAGTCGCCATCGGCAATGGCCAGGTTGGACAGCGTCGACAAACACACCAGACGTTGGCCGTAGCGCTTGCTCGGCA < NC_002947/885737‑885591 GCCTATTGCGGCGAAGCGCTGCAGAGCCTGCCGAGCA‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCC < 7:74287/147‑1 CTATTGCGGCGAAGCGCTGCAGAGCCTGCCGAGCA‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGC < 6:161200/149‑1 CTATTGCGGCGAAGCGCTGCAGAGCCTGCCGAGCA‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGC > 7:181111/1‑149 ATTGCGGCGAAGCGCTGCAGAGCCTGCCGAGCATAGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCGGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCG > 1:43183/1‑149 AAGCGCTGCAGAGCCTGCCGAGCA‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCC < 7:220227/134‑1 AAGCGCTGCAGAGCCTGCCGAGCA‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCC > 8:220227/1‑134 TGCCGAGCA‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGCCTCGAACAAGGGGTTACCGACCCG > 6:112621/1‑149 CCGAGCA‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGCCTCGAACAAGGGGTTACCGACCCGC < 4:282605/148‑1 CA‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGCCTCGAACAAGGGGTTACCGACCCGCTGGGCC < 5:112621/149‑1 A‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGCCTCGAACAAGGGGTTACCGACCCGCTGG > 5:233067/1‑145 A‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGCCTCGAACAAGGGGTTACCGACCCGCTGG < 6:233067/145‑1 CGCCTCGAACAAGGGGTTACCGACCCGCTGGGCCAGCTCCAGGGCCTCGCGGTTCCAGCCTCGGGCCCGCCAGAAGTCGCCATCGGCAATGGCCAGGTTGGACAGCGTCGACAAACACACCAGACGTTGGCCGTAGCGCTTGCTCGGCA < 4:197977/149‑1 CGCCTCGAACAAGGGGTTACCGACCCGCTGGGCCAGCTCCAGGGCCTCGCGGTTCCAGCCTCGGGCCCGCCAGAAGTCGCCATCGGCAATGGCCAGGTTGGACAGCGTCGACAAACACACCAGACGTTGGCCGTAGCGCTTGCTCGGCA < 7:86731/149‑1 GCCTATTGCGGCGAAGCGCTGCAGAGCCTGCCGAGCA‑AGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/885563‑885714 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgCCTCGAACAAGGGGTTACCGACCCGCTGGGCCAGCTCCAGGGCCTCGCGGTTCCAGCCTCGGGCCCGCCAGAAGTCGCCATCGGCAATGGCCAGGTTGGACAGCGTCGACAAACACACCAGACGTTGGCCGTAGCGCTTGCTCGGCA < NC_002947/885737‑885591 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |