New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 88571464 (1.300)5 (0.110) 5/244 NT 7.4% coding (1625/2718 nt) PP_0767 LuxR family transcriptional regulator
?NC_002947 = 885737 64 (1.360)coding (1648/2718 nt) PP_0767 LuxR family transcriptional regulator

TGCCGAGCAAGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTAC  >  NC_002947/885591‑885883
                                                                                                                                                  |                                                                                                                                                  
tGCCGAGCAAGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGcg                                                                                                                                                  <  7:86731‑M2/149‑3 (MQ=255)
tGCCGAGCAAGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGcg                                                                                                                                                  <  4:197977‑M2/149‑3 (MQ=255)
     aGCAAGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGgc                                                                                                                                             <  6:105933/149‑1 (MQ=255)
       cAAGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGgcg                                                                                                                                            >  7:124808/1‑148 (MQ=255)
             cTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCTGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTAc                                                                                                                                      >  1:14366/1‑148 (MQ=255)
                 ggCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGAcc                                                                                                                                  <  7:91092/148‑1 (MQ=255)
                    cAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGgc                                                                                                                              >  2:224960/1‑149 (MQ=255)
                     aaCGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAATCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGgcg                                                                                                                             >  2:127367/1‑149 (MQ=255)
                      aCGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGgcgc                                                                                                                            <  2:133666/149‑1 (MQ=255)
                                 gtTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCAt                                                                                                                 >  3:242981/1‑149 (MQ=255)
                                  tttGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATg                                                                                                                >  5:135054/1‑149 (MQ=255)
                                  tttGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATg                                                                                                                >  4:244091/1‑149 (MQ=255)
                                      tCGACGCTGTCCAACCTGGCCATTGCCGATGGCGTCTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGTTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCg                                                                                                            <  4:98067/149‑1 (MQ=255)
                                        gACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTg                                                                                                          <  1:303013/149‑1 (MQ=255)
                                        gACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTg                                                                                                          >  1:175454/1‑149 (MQ=255)
                                         aCGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTgg                                                                                                         <  5:87643/149‑1 (MQ=255)
                                          cGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGc                                                                                                        <  7:100541/149‑1 (MQ=255)
                                           gCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGc                                                                                                        >  4:16619/1‑148 (MQ=255)
                                             tGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCg                                                                                                       >  1:65/1‑147 (MQ=255)
                                                 cAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGtgc                                                                                                 >  8:97309/1‑149 (MQ=255)
                                                 cAACCTGGCCATTGCCGATGGCGACTTATGGCGGGCCCGAGGCTGGAACCGCGAGGCCATGGAGATGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGATGGCGCATTACGCCCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGtga                                                                                                 >  4:249033/1‑148 (MQ=255)
                                                            ttGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGgc                                                                                                                                             >  1:307111/1‑94 (MQ=255)
                                                            ttGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGgc                                                                                                                                             <  2:307111/94‑1 (MQ=255)
                                                            ttGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTg                                                                                      >  2:302943/1‑149 (MQ=255)
                                                              gCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGa                                                                                    >  2:70979/1‑149 (MQ=255)
                                                               ccGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGa                                                                                    <  8:86731/148‑1 (MQ=255)
                                                               ccGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGAc                                                                                   <  3:197977/149‑1 (MQ=255)
                                                                   tGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAg                                                                               <  8:124808/149‑1 (MQ=255)
                                                                    ggCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGt                                                                              >  7:144340/1‑149 (MQ=255)
                                                                     gCGTCTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAg                                                                               <  3:249033/147‑1 (MQ=255)
                                                                     gCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTg                                                                             <  8:181111/149‑1 (MQ=255)
                                                                       gACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCtgcgtgcg                                                                                         <  7:288918/135‑1 (MQ=255)
                                                                       gACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCtgcgtgcg                                                                                         >  8:288918/1‑135 (MQ=255)
                                                                            cTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCaa                                                                       <  3:65212/148‑1 (MQ=255)
                                                                               gCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCTGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAgg                                                                     <  2:14366/147‑1 (MQ=255)
                                                                               gCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAggg                                                                    <  4:242981/148‑1 (MQ=255)
                                                                               gCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGc                                                                   >  4:265101/1‑149 (MQ=255)
                                                                                   gCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGc                                                                >  5:144603/1‑148 (MQ=255)
                                                                                     ccGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGtgctgc                                                                                              >  7:139803/1‑116 (MQ=255)
                                                                                     ccGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGtgctgc                                                                                              <  8:139803/116‑1 (MQ=255)
                                                                                      cGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACg                                                            <  3:265101/149‑1 (MQ=255)
                                                                                      cGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACg                                                            >  2:226860/1‑149 (MQ=255)
                                                                                          gCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTg                                                        <  1:226860/149‑1 (MQ=255)
                                                                                          gCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTg                                                        >  4:95045/1‑149 (MQ=255)
                                                                                               aaCCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAgg                                                   <  6:135054/149‑1 (MQ=255)
                                                                                                     gAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTc                                             >  2:274888/1‑149 (MQ=255)
                                                                                                          ccTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGgcg                                         >  5:50283/1‑148 (MQ=255)
                                                                                                              gAGCTGGCCCAGCGGGTCGGTAATCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAg                                      <  1:127367/147‑1 (MQ=255)
                                                                                                              gAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAg                                      <  8:144340/147‑1 (MQ=255)
                                                                                                                gCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCt                                                         <  5:225117/126‑1 (MQ=255)
                                                                                                                gCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCt                                                         >  6:225117/1‑126 (MQ=255)
                                                                                                                 cTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTg                                                                                                          >  3:203818/1‑76 (MQ=255)
                                                                                                                 cTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTg                                                                                                          <  4:203818/76‑1 (MQ=255)
                                                                                                                 cTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGAGTGCGCTGGACGAAGTGCGCCAATGGCTGCAACGTCTGCAAGCGCTTTCGGCGCAGCGGCt                                 >  5:267752/1‑149 (MQ=255)
                                                                                                                   ggCCCAGCGGGTCGGTAACCCCTTGTTCGAGGcgctgggccagctccagggcctcgcggttccagcctcgggcccgccagaagtcgccatcggcaatggccaggttggacagcgtcgacaaacacaccagacgttggccgtagcgcttg                               <  5:112621‑M2/149‑118 (MQ=255)
                                                                                                                   ggCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCAGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTg                                >  2:274496/1‑148 (MQ=255)
                                                                                                                      ccAGCGGGTCGGTAACCCCTTGTTCGAGGcgctgggccagctccagggcctcgcggttccagcctcgggcccgccagaagtcgccatcggcaatggccaggttggacagcgtcgacaaacacaccagacgttggccgtagcgctt                                <  6:233067‑M2/145‑117 (MQ=255)
                                                                                                                      ccAGCGGGTCGGTAACCCCTTGTTCGAGGcgctgggccagctccagggcctcgcggttccagcctcgggcccgccagaagtcgccatcggcaatggccaggttggacagcgtcgacaaacacaccagacgttggccgtagcgctt                                >  5:233067‑M2/1‑29 (MQ=255)
                                                                                                                      ccAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATg                            >  3:107395/1‑149 (MQ=255)
                                                                                                                      ccAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATg                            <  3:16619/149‑1 (MQ=255)
                                                                                                                        aGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGcc                          >  2:250045/1‑149 (MQ=255)
                                                                                                                         gCGGGTCGGTAACCCCTTGTTCGAGGcgctgggccagctccagggcctcgcggttccagcctcgggcccgccagaagtcgccatcggcaatggccaggttggacagcgtcgacaaacacaccagacgttggccgtagcgcttgctcgg                          <  4:282605‑M2/148‑123 (MQ=255)
                                                                                                                          cGGGTCGGTAACCTTTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCcgt                        <  1:266623/149‑1 (MQ=255)
                                                                                                                          cGGGTCGGTAACCCCTTGTTCGAGGcgctgggccagctccagggcctcgcggttccagcctcgggcccgccagaagtcgccatcggcaatggccaggttggacagcgtcgacaaacacaccagacgttggccgtagcgcttgctcggca                        >  6:112621‑M2/1‑25 (MQ=255)
                                                                                                                            ggTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCcgtgc                      <  1:302943/149‑1 (MQ=255)
                                                                                                                                 gTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGtgcgtgcg                 >  3:145797/1‑149 (MQ=255)
                                                                                                                                      cccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCt            <  1:274888/149‑1 (MQ=255)
                                                                                                                                      cccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCt            >  8:299605/1‑149 (MQ=255)
                                                                                                                                       ccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGgc                                          >  1:72453/1‑118 (MQ=255)
                                                                                                                                       ccTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGgc                                          <  2:72453/118‑1 (MQ=255)
                                                                                                                                        cTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGa          >  8:167846/1‑149 (MQ=255)
                                                                                                                                         ttGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGAc         >  1:288582/1‑149 (MQ=255)
                                                                                                                                           gTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGAc         <  7:97309/147‑1 (MQ=255)
                                                                                                                                            ttCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGc       <  2:175454/148‑1 (MQ=255)
                                                                                                                                            ttCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCt      >  3:168713/1‑149 (MQ=255)
                                                                                                                                              cGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCtt     <  1:70979/148‑1 (MQ=255)
                                                                                                                                                aGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTAc  >  6:138782/1‑149 (MQ=255)
                                                                                                                                                aGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTAc  >  2:143344/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
TGCCGAGCAAGCGCTACGGCCAACGTCTGGTGTGTTTGTCGACGCTGTCCAACCTGGCCATTGCCGATGGCGACTTCTGGCGGGCCCGAGGCTGGAACCGCGAGGCCCTGGAGCTGGCCCAGCGGGTCGGTAACCCCTTGTTCGAGGCGCTGGCGCATTACGACCGGGCGCGGGTGCTGCATGCCCGTGGCGAAGTGCTGCGTGCGCTGGACGAAGTGCGCCAAGGGCTGCAACGTCTGCAAGGGCTTTCGGCGCAGCGGCTGTATGCCGTGCGTGCGCGGCTGACGCTTTAC  >  NC_002947/885591‑885883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.