New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 89378453 (1.070)4 (0.090) 4/242 NT 7.9% coding (265/303 nt) PP_0775 hypothetical protein
?NC_002947 = 893815 43 (0.920)coding (234/303 nt) PP_0775 hypothetical protein

TCCAAGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/893635‑893784
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgcaACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGCGCACAAGGGGCCGATAGCGCTACCCTTGACCGCTAATTTCTTGCACCGCTTATTTCGAGAAGCACGCATGCAGACATTTTTCATTGCGCCGACCGACTTTGGTGTCGGCCTGAC  <  NC_002947/893815‑893668
                                                                                                                                                                                                                                                                                                          
TCCAAGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCG                                                                                                                                                        >  5:157534/1‑148
  CAAGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGC                                                                                                                                                       <  3:136563/147‑1
                                 GTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGC                                                                                                                                                         <  7:243334/114‑1
                                 GTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGC                                                                                                                                                         >  8:243334/1‑114
                                         GACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGCGCACAA                                                                                                              <  2:269248/149‑1
                                         GACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGCGCAC                                                                                                                >  1:269248/1‑147
                                                              AATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGCGCAC                                                                                                                >  3:301850/1‑126
                                                              AATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGCGCAC                                                                                                                <  4:301850/126‑1
                                                                                                                                                TGCGCAACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGCGCACAAGGGGCCGATAGCGCTACCCTTGACCGCTAATTTCTTGCACCGCTTATTTCGAGAAGCACGCATGCAGACATTTTTCATTGCGCCGACCGACTTTGGTGTCGGC       <  4:96155/149‑1
                                                                                                                                                     AACACCTCGGCCAGCCTTTCGCTTGCGGCTGGTGCGCACAAGGGGCCGATAGCGCTACCCTTGACCGCTAATTTCTTGCACCGCTTATTTCGAGAAGCACGCATGCAGACATTTTTCATTGCGCCGACCGACTTTGGTGTCGGCCTGAC  <  7:214308/149‑1
                                                                                                                                                     AACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGCGCACAAGGGGCCGATAGCGCTACCCTTGACCGCTAATTTCTTGCACCGCTTATTTCGAGAAGCACGCATGCAGACATTTTTCATTGCGCCGACCGACTTTGGTGTCGGCCTGAC  >  5:63013/1‑149
                                                                                                                                                                                                                                                                                                          
TCCAAGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/893635‑893784
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgcaACACATCGGCCAGCCTTTCGCTTGCGGCTGGTGCGCACAAGGGGCCGATAGCGCTACCCTTGACCGCTAATTTCTTGCACCGCTTATTTCGAGAAGCACGCATGCAGACATTTTTCATTGCGCCGACCGACTTTGGTGTCGGCCTGAC  <  NC_002947/893815‑893668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.