New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 971933	54 (1.090)	4 (0.090)	4/244	NT	7.1%	coding (225/1863 nt)	secD	protein translocase subunit SecD
	?	NC_002947	= 971965	53 (1.130)					coding (257/1863 nt)	secD	protein translocase subunit SecD

CGCTCCCAACCTCTACCCGGATGACCCGGCGGTACAGATCAGCGGTGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/971780‑971933 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcTGGTCTTCCTGATTGGTCAGGCGGATCAGCCCGCTGC  <  NC_002947/971965‑971929                                                                                                                                                                                                 CGCTCCCAACCTCTACCCGGATGACCCGGCGGTACAGATCAGCGGTGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGG                                            <  6:218834/149‑1    TCCCAACCTCTACCCGGATGACCCGGCGGTACAGATCAGCGGTGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGG                                           >  5:123652/1‑147      CCAACCTCTACCCGGATGACCCGGCGGTACAGATCTGCGGTGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGC                                       >  2:295818/1‑149      CCAACCTCTACCCGGATGACCCGGCGGTACAGATCAGCGGTGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGC                                       <  4:76255/149‑1               ACCCGGATGACCCGGCGGTACAGATCAGCGGTGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAG                                        >  3:58684/1‑139               ACCCGGATGACCCGGCGGTACAGATCAGCGGTGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAG                                        <  4:58684/139‑1                                                     TCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCTGGTCTTCCTGATTGGTCAGGCGGATCAGCCCGCTG   <  1:20253/138‑1                                                     TCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCTGGTCTTCCTGATTGGTCAGGCGGATCAGCCCGCTG   >  2:20253/1‑138                                                                                             GCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCTGGTCTTCCTGATTGGTCAGGCGGATCAGCCCGCTGC  >  5:114380/1‑99                                                                                             GCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCTGGTCTTCCTGATTGGTCAGGCGGATCAGCCCGCTGC  <  6:114380/99‑1                                                                                                                                                                                                 CGCTCCCAACCTCTACCCGGATGACCCGGCGGTACAGATCAGCGGTGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/971780‑971933 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcTGGTCTTCCTGATTGGTCAGGCGGATCAGCCCGCTGC  <  NC_002947/971965‑971929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.