New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 971933	54 (1.090)	4 (0.090)	4/244	NT	7.1%	coding (225/1863 nt)	secD	protein translocase subunit SecD
	?	NC_002947	= 971965	53 (1.130)					coding (257/1863 nt)	secD	protein translocase subunit SecD

TGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTC  >  NC_002947/971825‑972113                                                                                                                                             |                                                                                                                                                     tGCCAGCTCGGCGCTGCAGGTGAATCAGGCAGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCAAAGATCGCTGTCAAGGGCGCAAGCATGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTgccag                                                                                                                                              >  6:186245/1‑149 (MQ=255)   ccAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTgccagcc                                                                                                                                            <  1:295818/149‑1 (MQ=255)          ggCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGagg                                                                                                                                     <  5:223859/149‑3 (MQ=255)            cgcTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTa                                                                                                                                   <  7:247081/149‑1 (MQ=255)             gcTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAg                                                                                                                                  <  3:150351/149‑1 (MQ=255)              cTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGt                                                                                                                                 >  6:64183/1‑149 (MQ=255)                       aaTCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAgg                                                                                                                         >  6:91584/1‑148 (MQ=255)                         tCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGccc                                                                                                                      >  4:307538/1‑147 (MQ=255)                         tCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCAc                                                                                                                      >  1:275150/1‑149 (MQ=255)                             gCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTggg                                                                                                                  >  4:237092/1‑149 (MQ=255)                                   cTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCga                                                                                                               <  6:144909/146‑1 (MQ=255)                                   cTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCga                                                                                                               >  5:144909/1‑146 (MQ=255)                                      gATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCgatgat                                                                                                           <  2:275150/147‑1 (MQ=255)                                          gcgTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTAcgtc                                                                                                     >  1:154044/1‑149 (MQ=255)                                           cgTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCgat                                                                                                              >  5:203435/1‑139 (MQ=255)                                           cgTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCgat                                                                                                              <  6:203435/139‑1 (MQ=255)                                            gTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGt                                                                                                                                    <  4:276190/116‑1 (MQ=255)                                            gTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGt                                                                                                                                    >  3:276190/1‑116 (MQ=255)                                            gTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTAcgtcgt                                                                                                   >  4:290615/1‑149 (MQ=255)                                               aGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTgg                                                                                                 <  7:241838/148‑1 (MQ=255)                                                              gATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCACGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGcc                                                                                   >  4:273803/1‑147 (MQ=255)                                                              gATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCa                                                                                 <  5:64183/149‑1 (MQ=255)                                                                   cAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTTGCCCAGACTa                                                                            >  6:23277/1‑149 (MQ=255)                                                                     aGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGTCCCAGACTAcc                                                                          <  5:186245/149‑1 (MQ=255)                                                                        tCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCg                                                                       >  5:19694/1‑149 (MQ=255)                                                                            tGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAAt                                                                   >  3:23480/1‑149 (MQ=255)                                                                              tCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATgg                                                                 <  4:23480/149‑1 (MQ=255)                                                                                aaGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCt                                                               >  1:283976/1‑149 (MQ=255)                                                                                  gggCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTgc                                                             <  3:237092/149‑1 (MQ=255)                                                                                  gggCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTgc                                                             <  3:269752/149‑1 (MQ=255)                                                                                           ccTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGAGCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTgg                                                    <  1:40572/149‑1 (MQ=255)                                                                                                 tGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTgg                                                    <  6:173895/143‑1 (MQ=255)                                                                                                 tGAAAAGGGCAGCGGGCTGATACGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTgg                                                    >  5:173895/1‑143 (MQ=255)                                                                                                  gAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAgg                                                                                                                                        >  6:235890/1‑58 (MQ=255)                                                                                                  gAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAgg                                                                                                                                        <  5:235890/58‑1 (MQ=255)                                                                                                       gggCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGa                                        >  1:294134/1‑149 (MQ=255)                                                                                                         gCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAgctgcccttttcacccaggcttgcgcccttgacagcgatcttggcatcgaccagcgccttgc                                                                                        >  5:114380‑M2/1‑37 (MQ=255)                                                                                                         gCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAgctgcccttttcacccaggcttgcgcccttgacagcgatcttggcatcgaccagcgccttgc                                                                                        <  6:114380‑M2/99‑63 (MQ=255)                                                                                                         gCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCGCTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGAt                                       >  6:65279/1‑148 (MQ=255)                                                                                                         gCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGAt                                       >  2:183587/1‑148 (MQ=255)                                                                                                          cAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAgctgcccttttcacccaggcttgcgcccttgacagcgatcttggcatcgaccagcgccttgctgacgcgatcaaggtcggcctgattcacctgcagcgccga                                                >  2:20253‑M2/1‑36 (MQ=255)                                                                                                          cAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAgctgcccttttcacccaggcttgcgcccttgacagcgatcttggcatcgaccagcgccttgctgacgcgatcaaggtcggcctgattcacctgcagcgccga                                                <  1:20253‑M2/138‑103 (MQ=255)                                                                                                               ggCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTg                                <  2:294134/149‑1 (MQ=255)                                                                                                               ggCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTg                                >  8:81034/1‑149 (MQ=255)                                                                                                                gCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTgg                               <  2:154044/149‑1 (MQ=255)                                                                                                                       cGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGa                        >  5:264184/1‑149 (MQ=255)                                                                                                                        gCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGAc                       >  1:87822/1‑149 (MQ=255)                                                                                                                        gCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGAc                       <  2:87822/149‑1 (MQ=255)                                                                                                                         ccTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGAcc                      >  3:14903/1‑149 (MQ=255)                                                                                                                          cTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCgatg                                                                                                             >  2:178296/1‑61 (MQ=255)                                                                                                                          cTGACCAATCAGGAAGACCAGCTGCCAGCCAACGATGTAGTGCGCAAGGCACTGGGCgatg                                                                                                             <  1:178296/61‑1 (MQ=255)                                                                                                                             aCCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTc                  <  5:23277/149‑1 (MQ=255)                                                                                                                               cAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCg                >  6:196234/1‑149 (MQ=255)                                                                                                                                aaTCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCgg               >  7:117268/1‑149 (MQ=255)                                                                                                                                  tCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCggtg             >  7:35539/1‑149 (MQ=255)                                                                                                                                  tCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCAGGACCTGTCCggtg             >  5:232640/1‑149 (MQ=255)                                                                                                                                    aGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCggtgg            <  8:117268/148‑1 (MQ=255)                                                                                                                                     ggAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGgtggtg          >  6:39488/1‑149 (MQ=255)                                                                                                                                     ggAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGgtggtg          >  2:7574/1‑149 (MQ=255)                                                                                                                                         gACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCa      >  2:256830/1‑149 (MQ=255)                                                                                                                                            cAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGa                        >  7:91703/1‑128 (MQ=255)                                                                                                                                            cAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGa                        <  8:91703/128‑1 (MQ=255)                                                                                                                                            cAGCCGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGa                        >  4:78732/1‑128 (MQ=255)                                                                                                                                            cAGCCGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGa                        <  3:78732/128‑1 (MQ=255)                                                                                                                                             aGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTc  <  6:232640/149‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                     TGCCAGCTCGGCGCTGCAGGTGAATCAGGCCGACCTTGATCGCGTCAGCAAGGCGCTGGTCGATGCCAAGATCGCTGTCAAGGGCGCAAGCCTGGGTGAAAAGGGCAGCGGGCTGATCCGCCTGACCAATCAGGAAGACCAGCTGCCAGCCAAGGATGTAGTGCGCAAGGCACTGGGCGATGATTACGTCGTGGCCCTGAACCTGGCCCAGACTACCCCGCAATGGCTGCGCAACCTGGGCGCAAGCCCGATGAAACTGGGCCTGGACCTGTCCGGTGGTGTGCACTTC  >  NC_002947/971825‑972113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.