| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1446314 = | 39 (0.790) | 8 (0.170) | 6/246 | NT | 16.6% | coding (412/2178 nt) | PP_1264 | fusaric acid resistance protein |
| ? | NC_002947 | 1446376 = | 43 (0.910) | coding (474/2178 nt) | PP_1264 | fusaric acid resistance protein | |||||
CCCGCCATACCGCTGCCATGAACGCCTGGTCGGGGTGTTGCAGCACCGGCAGGCCGATCATCGCTGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1446383‑1446314‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCCGCAATGCGCAACGCCCTGTACCAGCGCTTTGGCGTGTTTGCCGGGGTGGTGGTCGAGGCCCTGCGT > NC_002947/1446376‑1446523 CCCGCCATACCGCTGCCATGAACGCCTGGTCGGGGTGTTGCAGCACCGGCAGGCCGATCATCGCTGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTG > 1:143988/1‑104CCCGCCATACCGCTGCCATGAACGCCTGGTCGGGGTGTTGCAGCACCGGCAGGCCGATCATCGCTGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTG < 2:143988/104‑1 GCCATACCGCTGCCATGAACGCCTGGTCGGGGTGTTGCAGCACCGGCAGGCCGATCATCGCTGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCC > 3:199013/1‑149 GCCATACCGCTGCCATGAACGCCTGGTCGGGGTGTTGCAGCACCGGCAGGCCGATCATCGCTGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCC > 7:201232/1‑149 GCCATACCGCTGCCATGAACGCCTGGTCGGGGTGTTGCAGCACCGGCAGGCCGATCATCGCTGCG < 7:257145/65‑1 GCCATACCGCTGCCATGAACGCCTGGTCGGGGTGTTGCAGCACCGGCAGGCCGATCATCGCTGCG > 8:257145/1‑65 CATACCGCTGCCATGAACGCCTGGTCGGGGTGTTGCAGCACCGGCAGGCCGATCATCGCTGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCCG > 4:264336/1‑148 GTGTTGCAGCACCGGCAGGCCGATCATCGCTGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCCGCAATGCGCAACGCCCTGTACCAGCGCTTTG < 3:264336/149‑1 GGCCGATCATCGCTGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCCGCAATGCGCAACGCCCTGTACCAGCGCTTTGGCGTGTTTGCCGGGGTG < 8:201232/149‑1 GGCCGATCATCGCTGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCCGCAATGCGCAACGCCCCGTACCAGCGCTTTGGCGTGTTTGCCGGGGTG < 4:199013/149‑1 GTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCCGCAATGCGCAACGCCCTGTACCAGCGCTTTGGCGTGTTTGCCGGGGTGGTGGTCGAGGCCCTGCG > 7:65630/1‑149 TATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCCGCAATGCGCAACGCCCTGTACCAGCGCTTTGGCGTGTTTGCCGGGGTGGTGGTCGAGGCCCTGCGT > 1:50235/1‑149 CCCGCCATACCGCTGCCATGAACGCCTGGTCGGGGTGTTGCAGCACCGGCAGGCCGATCATCGCTGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1446383‑1446314‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggtATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCCGCAATGCGCAACGCCCTGTACCAGCGCTTTGGCGTGTTTGCCGGGGTGGTGGTCGAGGCCCTGCGT > NC_002947/1446376‑1446523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |