New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1446314 =39 (0.790)8 (0.170) 6/246 NT 16.6% coding (412/2178 nt) PP_1264 fusaric acid resistance protein
?NC_002947 1446376 = 43 (0.910)coding (474/2178 nt) PP_1264 fusaric acid resistance protein

TTCGGCGATGATGGTGGCGCTGATCGCCATCTTCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCCG  >  NC_002947/1446166‑1446458
                                                                                                                                                    |                                                                                                                                                
ttCGGCGATGATGGTGGCGCTGATCGCCATCTTCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTaca                                                                                                                                                  >  6:265272/1‑149 (MQ=255)
acgcagggcctcgaccaccaccccggcaaacacgccaaagcgctggtacagggcgttgcgcattgcggcactggccgactgcggcaggatcgcggcactgacgaaggtcgacaccagaatacccagggcgatttccagcgcccgccata                                                                                                                                                  >  1:50235‑M1/149‑149 (MQ=255)
 cgcagggcctcgaccaccaccccggcaaacacgccaaagcgctggtacagggcgttgcgcattgcggcactggccgactgcggcaggatcgcggcactgacgaaggtcgacaccagaatacccagggcgatttccagcgcccgccatAc                                                                                                                                                 >  7:65630‑M1/148‑149 (MQ=255)
  cGGCGATGATGGTGGCGCTGATCGCCATCTTCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTacac                                                                                                                                                 <  6:116305/148‑1 (MQ=255)
          atgGTGGCGCTGATCGCCATCTTCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCgat                                                                                                                                        <  7:94217/149‑1 (MQ=255)
           tggtggCGCTGATCGCCATCTTCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCgat                                                                                                                                        >  4:190968/1‑148 (MQ=255)
                 cgcTGATCGCCATCTTCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGc                                                                                                                                 <  1:137947/149‑1 (MQ=255)
                 cgcTGATCGCCATCTTCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGc                                                                                                                                 <  3:242772/149‑1 (MQ=255)
                  caccccggcaaacacgccaaagcgctggtacggggcgttgcgcattgcggcactggccgactgcggcaggatcgcggcactgacgaaggtcgacaccagaatacccagggcgatttccagcgcccgccatACCGCAGCGATGATCGGcc                                                                                                                                <  4:199013‑M1/19‑1 (MQ=255)
                  caccccggcaaacacgccaaagcgctggtacagggcgttgcgcattgcggcactggccgactgcggcaggatcgcggcactgacgaaggtcgacaccagaatacccagggcgatttccagcgcccgccatACCGCAGCGATGATCGGcc                                                                                                                                <  8:201232‑M1/19‑1 (MQ=255)
                      aTCGCCATCTTCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGcc                                                                                                                            <  7:9321/149‑1 (MQ=255)
                            aTCTTCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGtgct                                                                                                                      <  5:282408/149‑1 (MQ=255)
                                tCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCga                                                                                                                                         >  7:290737/1‑126 (MQ=255)
                                tCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCga                                                                                                                                         <  8:290737/126‑1 (MQ=255)
                                   caaagcgctggtacagggcgttgcgcattgcggcactggccgactgcggcaggatcgcggcactgacgaaggtcgacaccagaatacccagggcgatttccagcgcccgccatACCGCAGCGATGATCGGCCTGCCGGTGCTGCAacac                                                                                                               <  3:264336‑M1/36‑1 (MQ=255)
                                    gCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTacac                                                                                                                                                 <  7:236653/114‑1 (MQ=255)
                                    gCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTacac                                                                                                                                                 >  8:236653/1‑114 (MQ=255)
                                         acacCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGAc                                                                                                         >  1:136658/1‑149 (MQ=255)
                                                    tttCTGCCCAGCCTGGCGCTTTGGGAGGGCCTGTTCTCGGCCGGTTCCAAGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACAGCAGCGATGATCGGCCCGCCGGTGCTGCAACACCCCGACCAGGCGtt                                                                                                 <  1:203846/146‑1 (MQ=255)
                                                    tttCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCAt                                                                                              <  3:190968/149‑1 (MQ=255)
                                                      tCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATg                                                                                             >  7:246093/1‑148 (MQ=255)
                                                         gCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGc                                                                                                                                 >  3:123466/1‑109 (MQ=255)
                                                         gCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGc                                                                                                                                 <  4:123466/109‑1 (MQ=255)
                                                         gCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAgg                                                                                                     <  7:49281/137‑1 (MQ=255)
                                                         gCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAgg                                                                                                     >  8:49281/1‑137 (MQ=255)
                                                           cccgCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCg                                                                                       <  4:90850/146‑1 (MQ=255)
                                                            ccgCCGGGCGCGGTGGGTGGGCCTGTGCGCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCGGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATg                                                                                             <  8:130512/140‑1 (MQ=255)
                                                            cAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATg                                                                                             >  7:130512/1‑142 (MQ=255)
                                                              gCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTa                                                                                    <  5:265272/149‑1 (MQ=255)
                                                                 cggcactggccgactgcggcaggatcgcggcactgacgaaggtcgacaccagaatacccagggcgatttccagcgcccgccatACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATg                                                                                  >  4:264336‑M1/84‑148 (MQ=255)
                                                                  ggcactggccgactgcggcaggatcgcggcactgacgaaggtcgacaccagaatacccagggcgatttccagcgcccgccatACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATggc                                                                                >  7:201232‑M1/83‑149 (MQ=255)
                                                                  ggcactggccgactgcggcaggatcgcggcactgacgaaggtcgacaccagaatacccagggcgatttccagcgcccgccatACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATggc                                                                                >  3:199013‑M1/83‑149 (MQ=255)
                                                                   gcgcTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATggcg                                                                               >  3:283749/1‑149 (MQ=255)
                                                                   gcgcTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATggcg                                                                               >  2:19129/1‑149 (MQ=255)
                                                                       tgtgGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATggcgggcg                                                                           >  1:201573/1‑149 (MQ=255)
                                                                           ggtgggCCTGTGCTCGGCCGGTTCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCTGGCGCTg                                                                        <  2:136658/148‑1 (MQ=255)
                                                                           ggtgggCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTgg                                                                       <  8:273183/149‑1 (MQ=255)
                                                                                  cTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATggcggg                                                                             >  6:211/1‑136 (MQ=255)
                                                                                  cTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATggcggg                                                                             <  5:211/136‑1 (MQ=255)
                                                                                              ggTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTACATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCt                                                    <  1:222424/149‑1 (MQ=255)
                                                                                               gTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTg                                                   <  1:19129/149‑1 (MQ=255)
                                                                                                   cATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGgtgt                                               >  6:19464/1‑149 (MQ=255)
                                                                                                            ccGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCg                                      >  5:126187/1‑149 (MQ=255)
                                                                                                            ccGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCg                                      >  1:95277/1‑149 (MQ=255)
                                                                                                                  cagaatacccagggcgatttccagcgcccgccatACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATggcggg                                                                             <  2:143988‑M1/70‑1 (MQ=255)
                                                                                                                  cagaatacccagggcgatttccagcgcccgccatACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATggcggg                                                                             >  1:143988‑M1/35‑104 (MQ=255)
                                                                                                                          ccTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGAGCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATc                        <  8:246093/149‑1 (MQ=255)
                                                                                                                           cTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATcc                       >  4:151622/1‑149 (MQ=255)
                                                                                                                              tGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTg                     <  2:143946/148‑1 (MQ=255)
                                                                                                                              tGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTg                     >  1:143946/1‑148 (MQ=255)
                                                                                                                                       gctggctgGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGATATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCgg           >  5:95273/1‑149 (MQ=255)
                                                                                                                                        ctggctggCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGc          <  4:283749/149‑1 (MQ=255)
                                                                                                                                             tggctACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTg     >  6:235512/1‑149 (MQ=255)
                                                                                                                                               gctACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGcc   >  6:73290/1‑149 (MQ=255)
                                                                                                                                                 tACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGAGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTCGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCATTGCCg  >  7:138124/1‑148 (MQ=255)
                                                                                                                                                   cacCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTg                     <  7:1799/127‑1 (MQ=255)
                                                                                                                                                   cacCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTg                     >  8:1799/1‑127 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
TTCGGCGATGATGGTGGCGCTGATCGCCATCTTCCCGCAGAACACCGAGCTGTTTCTGCCCAGCCTGGCGCTGTGGGTGGGCCTGTGCTCGGCCGGTGCCATGCGCTACCGCACCTTCCGCGCCTATGGTTTCGTGCTGGCTGGCTACACCGCAGCGATGATCGGCCTGCCGGTGCTGCAACACCCCGACCAGGCGTTCATGGCAGCGGTATGGCGGGCGCTGGAAATCGCCCTGGGTATTCTGGTGTCGACCTTCGTCAGTGCCGCGATCCTGCCGCAGTCGGCCAGTGCCG  >  NC_002947/1446166‑1446458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.