| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2275170 = | 67 (1.360) | 5 (0.110) | 5/240 | NT | 8.5% | coding (320/1119 nt) | PP_2005 | hypothetical protein |
| ? | NC_002947 | 2275244 = | 45 (0.970) | coding (246/1119 nt) | PP_2005 | hypothetical protein | |||||
CGAACCACTGCTGTACCCCGGCGACTATCAAAACCTGCAACGCCTGCACCGCAAGCTCGCAGCCTATCTGGAGCAAGCCCGCGCCCAAGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2275322‑2275170‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcgcgGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGTGGTTCGACACCGAGCAGGTTGCCGTGCTCGCCCGGTACGCCATGGTTAAGCGCCAGTTCGATGCGCAGG > NC_002947/2275244‑2275385 CGAACCACTGCTGTACCCCGGCGACTATCAAAACCTGCAACGCCTGCACCGCAAGCTCGCAGCCTATCTGGAGCAAGCCCGCGCCCAAGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGG > 7:286399/1‑149 GAACCACTGCTGTACCCCGGCGACTATCAAAACCTGCAACGCCTGCACCGCAAGCTCGCAGCCTATCTGGAGCAAGCCCGCGCCCAAGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGC > 4:95623/1‑149 CCACTGCTGTACCCCGGCGACTATCAAAACCTGCAACGCCTGCACCGCAAGCTCGCAGCCTATCTGGAGCAAGCCCGCGCCCAAGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCG < 4:76051/149‑1 CCGCGCCCAAGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCGGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGTG > 2:139727/1‑149 CGCGCCCAAGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCGGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGTGG > 8:173707/1‑149 GCCCAAGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCGGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGTGGTTC < 7:173707/149‑1 AGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCGGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGTGGTTCGACAC > 3:125896/1‑149 CCTGGCTGTGGGCGCGGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGTGGTTCGACACCGAGCAGGTTGCCGTGCTCGCCCGGTACGCCATGGTTAAGCGCCAGTTC < 1:139727/148‑1 GGGCGCGGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGTGGTTCGACACCGAGCAGGTTGCCGTGCTCGCCCGGTACGCCATGGTTAAGCGCCAGTTCGATGCGCAGG > 2:146933/1‑149 CGAACCACTGCTGTACCCCGGCGACTATCAAAACCTGCAACGCCTGCACCGCAAGCTCGCAGCCTATCTGGAGCAAGCCCGCGCCCAAGGCCTGGTGAACCCGCGCACCGTGGTGGTGCTGCCGGAACACATCGGTACCTGGCTGTGGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2275322‑2275170‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcgcgGGCTTGCTCCAGATAGGCTGCGAGCTTGCGGTGCAGGCGTTGCAGGTTTTGATAGTCGCCGGGGTACAGCAGTGGTTCGACACCGAGCAGGTTGCCGTGCTCGCCCGGTACGCCATGGTTAAGCGCCAGTTCGATGCGCAGG > NC_002947/2275244‑2275385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |