| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2348248 | 44 (0.890) | 4 (0.090) | 4/232 | NT | 8.3% | coding (455/3084 nt) | PP_2065 | multidrug RND transporter |
| ? | NC_002947 | = 2348288 | 49 (1.100) | coding (495/3084 nt) | PP_2065 | multidrug RND transporter | |||||
ATGGCCAAGGTCAACCAGGTGCGCTATCGCCTGCCGGAAAAAGCCTACGACCCGGTGGTGGAACTGTCGGCAGGTGACTCCACCGCCGTGGCCTATGTGGGGTTTGCCAGCGACAGCCTGTCGATACCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2348118‑2348248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgataccggaGAACTGCGGTTCCACCACCCGCGACAGGTAATCGCTCAGTTCCGGTATCGACAGGCTGTCGCTGGCAAACCCCACATAGGCCACGGCGGTGGAGTCACCTGCCGACAGTTCCACCACCGGGTCGTAGGCTTTTTCCGGCAGGCGATA < NC_002947/2348288‑2348142 ATGGCCAAGGTCAACCAGGTGCGCTATCGCCTGCCGGAAAAAGCCTACGACCCGGTGGTGGAACTGTCGGCAGGTGACTCCACCGCCGTGGCCTATGTGGGGTTTGCCAGCGACAGCCTGTC < 5:172267/122‑1ATGGCCAAGGTCAACCAGGTGCGCTATCGCCTGCCGGAAAAAGCCTACGACCCGGTGGTGGAACTGTCGGCAGGTGACTCCACCGCCGTGGCCTATGTGGGGTTTGCCAGCGACAGCCTGTC > 6:172267/1‑122 AACCAGGTGCGCTATCGCCTGCCGGAAAAAGCCTACGACCCGGTGGTGGAACTGTCGGCAGGTGACTCCACCGCCGTGGCCTATGTGGGGTTTGCCAGCGACAGCCTGTCGATA > 7:285012/1‑114 AACCAGGTGCGCTATCGCCTGCCGGAAAAAGCCTACGACCCGGTGGTGGAACTGTCGGCAGGTGACTCCACCGCCGTGGCCTATGTGGGGTTTGCCAGCGACAGCCTGTCGATA < 8:285012/114‑1 TATCGCCTGCCGGAAAAAGCCTACGACCCGGTGGTGGAACTGTCGGCAGGTGACTCCACCGCCGTGGCCTATGTGGGGTTTGCCAGCGACAGCCTGTCGATACCGGAGAACTGCGGTTCCACCACCCGCGACAGGTAATCGCTCAGTTC > 2:184299/1‑149 GCCGGAAAAAGCCTACGACCCGGTGGTGGAACTGTCGGCAGGTGACTCCACCGCCGTGGCCTATGTGGGGTTTGCCAGCGACAGCCTGTCGATACCGGAGAACTGCGGTTCCACCACCCGCGACAGGTAATAGCTAAGTTACGGTATC > 6:82886/1‑148 CCGGAAAAAGCCTACGACCCGGTGGTGGAACTGTCGGCAGGTGACTCCACCGCCGTGGCCTATGTGGGGTTTGCCAGCGACAGCCTGTCGATACCGGAGAACTGCGGTTCCACCACCCGCGACAGGTAATCGCTCAGTTCCGGTATC < 1:184299/147‑1 GGAAAAAGCCTACGACCCGGTGGTGGAACTGTCGGCAGGAGACTCCACCGCCGTGGCCTATGTGGGGTTTGCCAGCGACAGCCTGTCGATACCGGAGAACTGCGGTTCCACCACCCGCGACAGGTAATCGCTCAGTTCCGGTATCGACA < 5:82886/149‑1 GTCGATACCGGAGAACTGCGGTTCCACCACCCGCGACAGGTAATCGCTCAGTTCCGGTATCGACAGGCTGTCGCTGGCAAACCCCACATAGGCCACGGCGGTGGAGTCACCTGCCGACAGTTCCACCACCGGGTCGTAGGCTTTTTCCG < 7:276699/149‑1 TCGATACCGGAGAACTGCGGTTCCACCACCCGCGACAGGTAATCGCTCAGTTCCGGTATCGACAGGCTGTCGCTGGCAAACCCCACATAGGCCACGGCGATGGAGTCACCTGCCGACAGTTCCACCACCGGGTCGTAGGCTTTTTCCGG < 5:22210/149‑1 CCGGAGAACTGCGGTTCCACCACCCGCGACAGGTAATCGCTCAGTTCCGGTATCGACAGGCTGTCGCT‑GCAAACCCCACATAGGCCACGGCGGTGGAGTCACCTGCCGACAGTTCCACCACCGGGTCGTAGGCTTTTTCCGGCAGGCG < 4:206287/148‑1 GAGAACTGCGGTTCCACCACCCGCGACAGGTAATCGCTCAGTTCCGGTATCGACAGGCTGTCGCTGGCAAACCCCACATAGGCCACGGCGGTGGAGTCACCTGCCGACAGTTCCACCACCGGGTCGTAGGCTTTTTCCGGCAGGCGATA < 1:289764/149‑1 ATGGCCAAGGTCAACCAGGTGCGCTATCGCCTGCCGGAAAAAGCCTACGACCCGGTGGTGGAACTGTCGGCAGGTGACTCCACCGCCGTGGCCTATGTGGGGTTTGCCAGCGACAGCCTGTCGATACCGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2348118‑2348248‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgataccggaGAACTGCGGTTCCACCACCCGCGACAGGTAATCGCTCAGTTCCGGTATCGACAGGCTGTCGCTGGCAAACCCCACATAGGCCACGGCGGTGGAGTCACCTGCCGACAGTTCCACCACCGGGTCGTAGGCTTTTTCCGGCAGGCGATA < NC_002947/2348288‑2348142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |