New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2357931 = | 54 (1.090) | 4 (0.090) | 4/238 | NT | 7.8% | coding (380/825 nt) | PP_2072 | AraC family transcriptional regulator |
? | NC_002947 | 2357977 = | 45 (0.980) | coding (334/825 nt) | PP_2072 | AraC family transcriptional regulator |
CATCGCTGGCGGGCTGTCCAGCGACCCGCGTCTGTACCACGCCAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2357978‑2357931 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagcgaTGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTG > NC_002947/2357977‑2358124 CATCGCTGGCGGGCTGTCCAGCGACCCGCGTCTGTACCACGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCAT < 3:22857/142‑1 CATCGCTGGCGGGCTGTCCAGCGACCCGCGTCTGTACCACGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCAT > 4:22857/1‑142 CTGGCGGGCTGTCCAGCGACCCGCGTCTGTACCACGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGG > 5:84460/1‑89 CTGGCGGGCTGTCCAGCGACCCGCGTCTGTACCACGCCAGCGATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGG < 6:84460/89‑1 ATGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTG > 3:293107/1‑149 CATCGCTGGCGGGCTGTCCAGCGACCCGCGTCTGTACCACGCCAGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2357978‑2357931 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccagcgaTGAAGGGCAAAGGCTGACCACCCAGCACGTTCTGGATCAGTGCCGGGTCGACGTAGGCCATGCGGTAGCGAAAGCCTGCGTCGGTGCCGGCCATGCCGTCATGCAGTTCGTCCGGGTGCAGCACCAGCGTGTTGCCCGGTATGCCGTG > NC_002947/2357977‑2358124 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |