| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2361924 = | 41 (0.830) | 5 (0.110) | 5/238 | NT | 13.3% | coding (1953/2724 nt) | PP_2076 | hypothetical protein |
| ? | NC_002947 | = 3838237 | 27 (0.590) | coding (1832/2673 nt) | PP_3388 | hypothetical protein | |||||
GGGTTTGCGGCTGACCTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAGCGGGCAGCCCATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2362077‑2361924‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggttgatgGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAAGTCAGCCGCAAACCCTGGTGCAGCGCGCGGTCCATGCTGTTGGGGGTGGCGGTGCGCAGCACTTGCCGCCCCAG < NC_002947/3838237‑3838095 GGGTTTGCGGCTGACCTTGTTCGCTTCGGTGCATGAAACGGGTGTCGATATTCGCCTGAGTGAAGCTGCACGTATCGGTGAGCCGATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGT < 4:308819/149‑1 TTTGCGGCTGACCTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAGCGGGCAGCCCATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGA < 3:153178/149‑1 TTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAGCGGGCAGCCCATCAACCCACAACGCAGCGCAGGCCAGGTATCAATGTACCTCGACCAGGCTTGGGCTGAAGGGTTG > 1:212737/1‑132 TTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAGCGGGCAGCCCATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTG < 2:212737/132‑1 TCGATATTCGCCTGAGTGAAGCTGCACGTAGCGGGCAGCCCATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGG > 7:256689/1‑104 TCGATATTCGCCTGAGTGAAGCTGCACGTAGCGGGCAGCCCATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGG < 8:256689/104‑1 AGCCCATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAAGTCAGC > 8:107424/1‑149 CATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAAGTCAGCCGC > 5:304301/1‑148 ATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAAGTCAGCCGCA > 3:299605/1‑148 CACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAAGTCAGCCGCAAACCCTGG < 7:107424/149‑1 GGCTTGGGCTGAAGGGTTGATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAAGTCAGCCGCAAACCCTGGTGCAGCGCGCGGTCCATGCTGTTGGGGGTGGCGGTGCGCA < 4:299605/149‑1 TTGATGGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAAGTCAGCCGCAAACCCTGGTGCAGCGCGCGGTCCATGCTGTTGGGGGTGGCGGTGCGCAGCACTTGCCGCCCCAG > 3:257909/1‑149 GGGTTTGCGGCTGACCTTGTTCGCTTCGGTGCATGAAACGGCTGTCGATATTCGCCTGAGTGAAGCTGCACGTAGCGGGCAGCCCATCAACCCACAACGCAGCGCAGGCCAGGTATCAAGGTACCTCGACCAGGCTTGGGCTGAAGGGTTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2362077‑2361924‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggttgatgGGCTGCCCGCTACGTGCAGCTTCACTCAGGCGAATATCGACAGCCGTTTCATGCACCGAAGCGAACAAAGTCAGCCGCAAACCCTGGTGCAGCGCGCGGTCCATGCTGTTGGGGGTGGCGGTGCGCAGCACTTGCCGCCCCAG < NC_002947/3838237‑3838095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |