| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2407945 = | 43 (0.870) | 6 (0.130) | 4/248 | NT | 11.9% | coding (620/1566 nt) | PP_2111 | aerotaxis receptor |
| ? | NC_002947 | 2408003 = | 47 (0.980) | coding (562/1566 nt) | PP_2111 | aerotaxis receptor | |||||
TCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2408095‑2407945‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCAGGA > NC_002947/2408003‑2408095 TCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAG > 6:324844/1‑149 CTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGC < 3:241254/148‑1 TGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCA > 1:253989/1‑148 TGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCA > 5:306046/1‑148 TCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAA > 5:90639/1‑96 TCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAA > 5:95151/1‑96 TCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAA < 6:90639/96‑1 TCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAA < 6:95151/96‑1 GCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCAGG > 3:258025/1‑149 CTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCAGGA < 4:258025/149‑1 TCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2408095‑2407945‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATCAGGA > NC_002947/2408003‑2408095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |