| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2568772 = | 47 (0.950) | 3 (0.060) | 3/244 | NT | 6.0% | coding (776/1050 nt) | PP_2252 | hypothetical protein |
| ? | NC_002947 | 2568831 = | 50 (1.060) | coding (717/1050 nt) | PP_2252 | hypothetical protein | |||||
GCGCCAGCACTTGCATCAGCAGGCCAGCAAAGGCCCTGGCCGGACCGATGTCGGGCTCAACTCGGTGGCCACCCAGGCCAGCGAAAAGCTTGGCGCCACCCTGGCCCCACGCGGGATCGCCAGTGCCGTGGCATCGGCAGTGGGCAAGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2568924‑2568772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcGCCAAGCTTTTCGCTGGCCTGGGTGGCCACCGAGTTGAGCCCGACATCGGTCCGGCCAGGGCCTTTGCTGGCCTGCTGATGCAAGTGCTGGCGCATGGCTTGCCAGGCCGGCTGCTGGTCCAGTGACTTGGCCCGCAGCAGCT > NC_002947/2568831‑2568973 GCGCCAGCACTTGCATCAGCAGGCCAGCAAAGGCCCTGGCCGGACCGATGTCGGGCTCAACTCGGTGGCCACCCAGGCCAGCGAAAAGCTTGGCGCCACCCTGGCCCCACGCGGGATCGCCAGTGCCGTGGCATCGGCAGTGGGCAAGG > 3:94881/1‑149 GCCAGCACTTGCATCAGCAGGCCAGCAAAGGCCCTGGCCGGACCGATGTCGGGCTCAACTCGGTGGCCACCCAGGCCAGCGAAAAGCTTGGCGCCACCCTGGCCCCACGCGGGATCGCCAGTGCCGTGGCATCGGCAGTGGGCAAGGTG > 2:140400/1‑149 CCAGCACTTGCATCAGCAGGCCAGCAAAGGCCCTGGCCGGACCGATGTCGGGCTCAACTCGGTGGCCACCCAGGCCAGCGAAAAGCTTGGCGCCACCCTGGCCCCACGCGGGATCGCCAGTGCCGTGGCATCGGCAGTGGGCAAGGTGG < 2:310740/149‑1 CCAGCACTTGCATCAGCAGGCCAGCAAAGGCCCTGGCCGGACCGATGTCGGGCTCAACTCGGTGGCCACCCAGGCCAGCGAAAAGCTTGGCGCCACCCTGGCCCCACGCGGGATCGCCAGTGCCGTGGCATCGGCAGTGGGCAAGGTGG < 7:212566/149‑1 ACCCAGGCCAGCGAAAAGCTTGGCGCCACCCTGGCCCCACGCGGGATCGCCAGTGCCGTGGCATCGGCAGTGGGCAAGGT > 1:307567/1‑80 ACCCAGGCCAGCGAAAAGCTTGGCGCCACCCTGGCCCCACGCGGGATCGCCAGTGCCGTGGCATCGGCAGTGGGCAAGGT < 2:307567/80‑1 CGCCACCCTGGCCCCACGCGGGATCGCCAGTGCCGTGGCATCGGCAGTGGGCAAGGTGGCGCCAAGCTTTTCGCTGGCCTGGGTGGCCACCGAGTTGAGCCCGACATCGGTCCGGCCAGGGCCTTTGCTGGCCTGCTGATGCAAGTGCT > 2:52827/1‑149 CCACCCTGGCCCCACGCGGGATCGCCAGTGCCGTGGCATCGGCAGTGGGCAAGGTGGCGCCAAGCTTTTCGCTGGCCTGGGTGGCCACCGAGTTGAGCCCGACATCGGTCCGGCCAGGGCCTTTGCTGGCCTGCTGATGCAAGTGCTGG > 2:80100/1‑149 GCCCCACGCGGGATCGCCAGTGCCGTGGCATCGGCAGTGGGCAAGGTGGCGCCAAGCTTTTCGCTGGCCTGGGTGGCCACCGAGTTGAGCCCGACATCGGTCCGGCCAGGGGCTTTGCTGGCCTGCTGATGCAAGTGCTGGCGCATGG < 1:52827/148‑1 GGTGGCGCCAAGCTTTTCGCTGGCCTGGGTGGCCACCGAGTTGAGCCCGACATCGGTCCGGCCAGGGCCTTTGCTGGCCTGCTGATGCAAGTGCTGGCGCATGGCTTGCCAGGCCGGCTGCTGGTCCAGTGACTTGGCCCGCAGCAGCT > 3:204166/1‑149 GCGCCAGCACTTGCATCAGCAGGCCAGCAAAGGCCCTGGCCGGACCGATGTCGGGCTCAACTCGGTGGCCACCCAGGCCAGCGAAAAGCTTGGCGCCACCCTGGCCCCACGCGGGATCGCCAGTGCCGTGGCATCGGCAGTGGGCAAGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2568924‑2568772‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggcGCCAAGCTTTTCGCTGGCCTGGGTGGCCACCGAGTTGAGCCCGACATCGGTCCGGCCAGGGCCTTTGCTGGCCTGCTGATGCAAGTGCTGGCGCATGGCTTGCCAGGCCGGCTGCTGGTCCAGTGACTTGGCCCGCAGCAGCT > NC_002947/2568831‑2568973 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |