New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2597695 | 57 (1.150) | 4 (0.090) | 4/242 | NT | 7.6% | coding (70/753 nt) | PP_2276 | exonuclease |
? | NC_002947 | = 2597753 | 44 (0.940) | coding (128/753 nt) | PP_2276 | exonuclease |
GATGCGGAACTGGGCGCTGACTTAGTGAAGCTCTTCGGCCAATACGGCTTCATCTTCCAAGAAGACCTGACAGAGATTCGCGAGTGCGCAGAGTTATCATCGACGCCGATGTCCTATCCGTCCAAGCAGCAGTAGTAAACCAGAAAGCCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2597543‑2597695 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatccTCTTCAAATGCGTGGAGGGTCCAGAGGGCTCGTTCACCCTCCTCATCGCCTCCCCAGCGGATGGCTTTCTGGTTTACTACTGCTGCTTGGACGGATAGGACATCGGCGTCGATGATAACTCTGCGCACTCGCGAATCTCTGT < NC_002947/2597753‑2597612 GATGCGGAACTGGGCGCTGACTTAGTGAAGCTCTTCGGCCAATACGGCTTCATCTTCCAAGAAGACCTGACAGAGATTCGCGAGTGCGCAGAGTTATCATCGACGCCGATGTCCTATCCGTCCAAGCAGCAGTAGTAAACCAGAAAGC > 5:159680/1‑148 TTCCAAGAAGACCTGACAGAGATTCGCGAGTGCGCAGAGTTATCATCGACGCCGATGTCCTATCCGTCCAAGCAGCAGTAGTAAACCAGAAAGCCATCCTCTTCAAATGCGTGGAGGGTCCAGAGGGCTCGTTCACCCTCCTCATCGCC > 4:98458/1‑149 CCAAGAAGACCTGACAGAGATTCGCGAGTGCGCAGAGTTATCATCGACGCCGATGTCCTATCCGTCCAAGCAGCAGTAGTAAACCAGAAAGCCATCCTCTTCAAATGCGTGGAGGGTCCAGAGGGCTCGTTCACCCTCCTCATCGCCTC > 2:116252/1‑149 GATTCGCGAGTGCGCAGAGTTATCATCGACGCCGATGTCCTATCCGTCCAAGCAGCAGTAGTAAACCAGAAAGCCATCCTCTTCAAATGCGTGGAGGGTCCAGAGGGCTCGTTCACCCTCCTCATCGCCTCCCCAGCGGATGGCTTTCT < 3:98458/149‑1 TTCGCGAGTGCGCAGAGTTATCATCGACGCCGATGTCCTATCCGTCCAAGCAGCAGTAGTAAACCAGAAAGCCATCCTCTTCAAATGCGTGGAGGGTCCAGAGGGCTCGTTCACCCTCCTCATCGCCTCCCCAGCGGATGGCTTTCTGG < 1:116252/149‑1 CCATCCTCTTCAAATGCGTGGAGGGTCCAGAGGGCTCGTTCACCCTCCTCATCGCCTCCCCAGCGGATGGCTTTCTGGTTTACTACTGCTGCTTGGACGGATAGGACATCGGCGTCGATGATAACTCTGCGCACTCGCGAATCTCTGT > 4:194879/1‑148 GATGCGGAACTGGGCGCTGACTTAGTGAAGCTCTTCGGCCAATACGGCTTCATCTTCCAAGAAGACCTGACAGAGATTCGCGAGTGCGCAGAGTTATCATCGACGCCGATGTCCTATCCGTCCAAGCAGCAGTAGTAAACCAGAAAGCCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2597543‑2597695 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatccTCTTCAAATGCGTGGAGGGTCCAGAGGGCTCGTTCACCCTCCTCATCGCCTCCCCAGCGGATGGCTTTCTGGTTTACTACTGCTGCTTGGACGGATAGGACATCGGCGTCGATGATAACTCTGCGCACTCGCGAATCTCTGT < NC_002947/2597753‑2597612 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |