New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2988836 = | 43 (0.870) | 3 (0.060) | 3/248 | NT | 7.2% | coding (506/951 nt) | PP_2613 | hypothetical protein |
? | NC_002947 | 2988881 = | 36 (0.750) | coding (461/951 nt) | PP_2613 | hypothetical protein |
CCGAGGTTGGCCTGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCACTCACCATGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2988986‑2988836 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGA > NC_002947/2988881‑2989028 CCGAGGTTGGCCTGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCACTCACCATGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGG < 6:160622/149‑1 CCTGACCACAGCGTTGCCACTCACCATGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGC > 1:16650/1‑91 CCTGACCACAGCGTTGCCACTCACCATGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGC < 2:16650/91‑1 TTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGG < 3:104708/145‑1 TTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGG > 4:104708/1‑145 AGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTC > 5:143589/1‑149 TGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGA > 5:18400/1‑149 CCGAGGTTGGCCTGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCACTCACCATGTCACACCGGACCATCTTGCAGCCTGGCTGAATGCGCTGGACGACGACCATCGCAAGGCCTGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2988986‑2988836 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggctGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGA > NC_002947/2988881‑2989028 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |