New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2988836 = | 43 (0.870) | 3 (0.060) | 3/248 | NT | 7.2% | coding (506/951 nt) | PP_2613 | hypothetical protein |
? | NC_002947 | 2988881 = | 36 (0.750) | coding (461/951 nt) | PP_2613 | hypothetical protein |
GCCTGCTTGCAGCCGATCAAGTTCAAGCTGCTGGAGGGTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGG > NC_002947/2988688‑2988976 | tcacgacctggatgcctatcggtggagccatcgcgctggatgccgaggttggcctggcagcgctggcagaccacttcaccagcctggtgcaggtcgtgctccctgaccacagcgttgccactcaccatgtcacaccggaccatcttgca > 5:18400‑M1/149‑149 (MQ=255) cTGCTTGCAGCCGATCAAGTTCAAGCTGCTGGAGGGTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGc > 5:185063/1‑149 (MQ=255) cTGCTTGCAGCCGATCAAGTTCAAGCTGCTGGAGGGTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGc > 8:178513/1‑149 (MQ=255) cAGCCGATCAAGTTCAAGCTGCTGGAGGGTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGcc < 2:78784/148‑1 (MQ=255) aTCAAGTTCAAGCTGCTGGAGGGTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGAt > 2:227966/1‑149 (MQ=255) gTTCAAGCTGCTGGAGGGTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGgtcg < 5:39206/149‑1 (MQ=255) gctgctGGAGGGTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGgtcgtcgtc > 8:37833/1‑148 (MQ=255) ctgctgGAGGGTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGgtcgtcgtc > 6:30621/1‑147 (MQ=255) gAGGGTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAgcgc < 1:227966/147‑1 (MQ=255) aGGGTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGCTGGACGACGACCATCGCaag < 7:178513/149‑3 (MQ=255) ggTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCAtt > 6:81212/1‑147 (MQ=255) tCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGc > 6:136917/1‑149 (MQ=255) tCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGc < 5:30621/149‑1 (MQ=255) aaaGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCa < 1:305179/149‑1 (MQ=255) aGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAgg > 1:95307/1‑149 (MQ=255) gaggttggcctggcagcgctggcagaccacttcaccagcctggtgcaggtcgtgctccctgaccacagcgttgccactcaccatgtcacaccggaccatcttgcAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCt > 5:143589‑M1/105‑149 (MQ=255) gCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCt > 6:38486/1‑149 (MQ=255) cctggcagcgctggcagaccacttcaccagcctggtgcaggtcgtgctccctgaccacagcgttgccactcaccatgtcacaccggaccatcttgcAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCaa < 3:104708‑M1/49‑1 (MQ=255) cctggcagcgctggcagaccacttcaccagcctggtgcaggtcgtgctccctgaccacagcgttgccactcaccatgtcacaccggaccatcttgcAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCaa > 4:104708‑M1/97‑145 (MQ=255) aTTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGa < 5:38486/146‑1 (MQ=255) ttttGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGt > 1:314038/1‑149 (MQ=255) aaTCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGt < 1:214032/149‑1 (MQ=255) aaTCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGt > 8:144236/1‑149 (MQ=255) ggCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAg < 7:37833/148‑1 (MQ=255) ggCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGt < 2:95307/149‑1 (MQ=255) ggCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGt > 1:161002/1‑149 (MQ=255) gCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTg > 6:140118/1‑149 (MQ=255) cTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATg > 4:269383/1‑141 (MQ=255) cTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATg < 3:269383/141‑1 (MQ=255) cTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTgg < 5:81212/149‑1 (MQ=255) ttttCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCaa < 5:136917/148‑1 (MQ=255) tCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGc < 2:314038/148‑1 (MQ=255) gtgtgtTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCtgt < 7:144236/149‑1 (MQ=255) gtgtTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTgg > 5:246366/1‑149 (MQ=255) ttttCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCa < 8:73934/149‑1 (MQ=255) tttCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAg > 6:31177/1‑149 (MQ=255) cATTCATGAG‑CTGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGc < 3:190859/149‑1 (MQ=255) cATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGACACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCAc < 6:185063/148‑1 (MQ=255) aGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCt > 1:6536/1‑149 (MQ=255) ccGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGc > 7:174786/1‑149 (MQ=255) ccAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGc > 7:45337/1‑149 (MQ=255) aGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTg < 2:161002/149‑1 (MQ=255) aCTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGc < 8:175568/135‑1 (MQ=255) aCTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGc > 7:175568/1‑135 (MQ=255) tCGCCATGCCAACCGAGACACCGGGACAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGt > 8:263065/1‑149 (MQ=255) acCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTGAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAg > 7:127956/1‑149 (MQ=255) acCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTg < 7:221665/84‑1 (MQ=255) acCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTg > 8:221665/1‑84 (MQ=255) ccGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAgg < 5:140118/149‑1 (MQ=255) | GCCTGCTTGCAGCCGATCAAGTTCAAGCTGCTGGAGGGTCAAAGGCAGTTCTGATTTTGAGCGGGCAGCAATCGGCTTGTTTTCGTGTGTTTTCCATTCATGAGCCGGCCCCCAGTTGACTCGCCATGCCAACCGAGACACCGGGCCAAGCCAGGCCTTGCGATGGTCGTCGTCCAGCGCATTCAGCCAGGCTGCAAGATGGTCCGGTGTGACATGGTGAGTGGCAACGCTGTGGTCAGGGAGCACGACCTGCACCAGGCTGGTGAAGTGGTCTGCCAGCGCTGCCAGG > NC_002947/2988688‑2988976 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |