New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3143125 =	52 (1.050)	4 (0.090)	3/240	NT	7.7%	coding (49/1539 nt)	rbsA‑II	ribose ABC transporter ‑ ATP‑binding subunit
	?	NC_002947	3143163 =	47 (1.020)					coding (87/1539 nt)	rbsA‑II	ribose ABC transporter ‑ ATP‑binding subunit

TGGCCGTCGAGCAGCAGGCTGCCGGCGTCCGGGCGGTGGATGCCGGCCAGCACCTTGATCAGCGTAGACTTGCCGGCGCCGTTCTCGCCCACCAGACCGTGCACGCTGCCCGCCGCCACCCGCAGGCTGGCGCCGTCGAGCGCCCGGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3143276‑3143125 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggtggcGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCCTGCTGCTCGACGGCCAGCCGCACGGGCATTTCAGCCCGCGCCAGGTGGAG  >  NC_002947/3143163‑3143310                                                                                                                                                                                                                                                                                                              TGGCCGTCGAGCAGCAGGCTGCCGGCGTCCGGGCGGTGGATGCCGGCCAGCACCTTGATCAGCGTAGACTTGCCGGCGCCGTTCTCGCCCACCAGACCGTGCACGCTGCCCGCCGCCACCCGCAGGCTGGCGCCGTCGAGCGCCCGGGT                                                                                                                                                         <  4:21004/149‑1   GCCGGCGAGCAGCAGGCTGCCGGCGTCCGGGCGGTGGATGCCGGCCAGCACCTTGATCAGCGTAGACTTGCCGGCGCCGTTCTCGCCCACCAGACCGTGCACGCTGCCCGCCGCCACCCGCAGGCTGGCGCCGTCGAGCACCCGGGT                                                                                                                                                         <  8:112198/147‑1              GCAGGCTGCCGGCGTCCGGGCGGTGGATGCCGGCCAGCACCTTGATCAGCGTAGACTTGCCGGCGCCGTTCTCGCCCACCAGACCGTGCACGCTGCCCGCCGCCACCCGCAGGCTGGCGCCGTCGAGCGCCCGGGT                                                                                                                                                         <  7:273132/136‑1              GCAGGCTGCCGGCGTCCGGGCGGTGGATGCCGGCCAGCACCTTGATCAGCGTAGACTTGCCGGCGCCGTTCTCGCCCACCAGACCGTGCACGCTGCCCGCCGCCACCCGCAGGCTGGCGCCGTCGAGCGCCCGGGT                                                                                                                                                         >  8:273132/1‑136                                                                                                              CCGCCGCCACCCGCAGGCTGGCGCCGTCGAGCGCCCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCCTGCTGCTC                                            >  1:268948/1‑149                                                                                                                  CGCCACCCGCAGGCTGGCGCCGTCGAGCGCCCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCCTGCTGCTCGACG                                        <  2:268948/149‑1                                                                                                                  CGCCACCCGCAGGCTGGCGCCGTCGAGCGCCCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCCTGCTGCTCGACG                                        >  7:218127/1‑149                                                                                                                  CGCCACCCGCAGGCTGGCGCCGTCGAGCGCCCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCCTGCTGCTCGACG                                        >  8:264829/1‑149                                                                                                                                                        CGGCGCGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCCTGCTGCTCGACGGCCAGCCGCACGGGCAATTCAGCCCGCGCCAGGTGGAG  >  4:290282/1‑149                                                                                                                                                                                                                                                                                                              TGGCCGTCGAGCAGCAGGCTGCCGGCGTCCGGGCGGTGGATGCCGGCCAGCACCTTGATCAGCGTAGACTTGCCGGCGCCGTTCTCGCCCACCAGACCGTGCACGCTGCCCGCCGCCACCCGCAGGCTGGCGCCGTCGAGCGCCCGGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3143276‑3143125 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggtggcGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCCTGCTGCTCGACGGCCAGCCGCACGGGCATTTCAGCCCGCGCCAGGTGGAG  >  NC_002947/3143163‑3143310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.