New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3143125 = | 52 (1.050) | 4 (0.090) | 3/240 | NT | 7.7% | coding (49/1539 nt) | rbsA‑II | ribose ABC transporter ‑ ATP‑binding subunit |
? | NC_002947 | 3143163 = | 47 (1.020) | coding (87/1539 nt) | rbsA‑II | ribose ABC transporter ‑ ATP‑binding subunit |
ACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCCTGCTGC > NC_002947/3142977‑3143266 | ctccacctggcgcgggctgaattgcccgtgcggctggccgtcgagcagcaggctgccggcgtccgggcggtggatgccggccagcaccttgatcagcgtagacttgccggcgccgttctcgcccaccagaccgtgcacgctgcgcgccg > 4:290282‑M1/149‑149 (MQ=255) cACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACTCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCt < 1:279664/148‑1 (MQ=255) cACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTc > 8:8300/1‑149 (MQ=255) cACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTc < 1:119739/149‑1 (MQ=255) gATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGAc > 3:211812/1‑149 (MQ=255) cccGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGc > 1:268623/1‑149 (MQ=255) cccGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGc > 4:135454/1‑149 (MQ=255) ccGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGcc < 1:181599/149‑1 (MQ=255) ccGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGcc > 5:1722/1‑149 (MQ=255) ttCGTCGAGACCCTGCTGCCCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGCGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTCGCATAGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGACTGCGGGTg > 5:267619/1‑149 (MQ=255) cgtcgagcagcaggctgccggcgtccgggcggtggatgccggccagcaccttgatcagcgtagacttgccggcgccgttctcgcccaccagaccgtgcacgctgcccgccGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTggcg > 8:264829‑M1/111‑149 (MQ=255) cgtcgagcagcaggctgccggcgtccgggcggtggatgccggccagcaccttgatcagcgtagacttgccggcgccgttctcgcccaccagaccgtgcacgctgcccgccGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTggcg > 7:218127‑M1/111‑149 (MQ=255) cgtcgagcagcaggctgccggcgtccgggcggtggatgccggccagcaccttgatcagcgtagacttgccggcgccgttctcgcccaccagaccgtgcacgctgcccgccGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTggcg < 2:268948‑M1/39‑1 (MQ=255) gagcagcaggctgccggcgtccgggcggtggatgccggccagcaccttgatcagcgtagacttgccggcgccgttctcgcccaccagaccgtgcacgctgcccgccGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGcggcgg > 1:268948‑M1/107‑149 (MQ=255) ccTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACGTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAg > 1:258982/1‑149 (MQ=255) ccTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAg > 5:217956/1‑149 (MQ=255) ctgctgACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGc < 4:211812/149‑1 (MQ=255) ctgACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGt < 2:122697/148‑1 (MQ=255) cccACGGCGGGCAACGGCGATGACGTCAAACGCATCCGAGGCGACGCAGGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAACCTGCGGGTGGCGGCGGGCAGCGTGCAc < 7:114442/148‑1 (MQ=255) aCCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCa < 4:178059/148‑1 (MQ=255) ccACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCAc < 2:258982/148‑1 (MQ=255) gggCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGt > 8:235216/1‑122 (MQ=255) gggCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGt < 7:235216/122‑1 (MQ=255) aaCGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGc < 2:268623/149‑1 (MQ=255) gATGACGTCAACCGCATCCGAGGCGACGCATGAGGACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGaa < 7:227191/148‑1 (MQ=255) atcaCGTCAAACGCATCCGAGGCGACGCATGAGTACGCCCGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTCCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACg > 1:207664/4‑149 (MQ=255) tGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACgg < 6:1722/149‑1 (MQ=255) tGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACgg > 2:51098/1‑149 (MQ=255) cGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGgcgc > 5:296453/1‑149 (MQ=255) gTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCtggtgg > 8:278226/1‑135 (MQ=255) gTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCtggtgg < 7:278226/135‑1 (MQ=255) gTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGcc > 3:92018/1‑149 (MQ=255) cAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGgcgc < 6:234228/146‑1 (MQ=255) cAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGgcgc > 5:234228/1‑146 (MQ=255) aaaCGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCgag > 2:294244/1‑137 (MQ=255) aaaCGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCgag < 1:294244/137‑1 (MQ=255) aaaCGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCgg > 7:2895/1‑148 (MQ=255) aaaCGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGc < 7:8300/149‑1 (MQ=255) aTCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTc > 5:132061/1‑148 (MQ=255) gAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGc > 7:68394/1‑149 (MQ=255) aGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGGGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCt < 4:92018/149‑1 (MQ=255) gACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATc < 6:217956/149‑1 (MQ=255) gCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAg > 2:316171/1‑149 (MQ=255) gCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAg < 6:132061/149‑1 (MQ=255) gCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAg < 1:182569/149‑1 (MQ=255) aTGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGCTCAAGGt > 3:230717/1‑149 (MQ=255) tGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTg < 8:65563/149‑1 (MQ=255) gAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTg < 6:267619/148‑1 (MQ=255) cGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGa > 2:144967/1‑149 (MQ=255) gTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGAc < 3:135454/149‑1 (MQ=255) tGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACg > 3:308733/1‑149 (MQ=255) cATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCg < 8:68394/149‑1 (MQ=255) aTTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCgg > 8:214507/1‑149 (MQ=255) gACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCctgc < 1:51098/149‑1 (MQ=255) aCCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCctgct > 1:302/1‑149 (MQ=255) aCCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCctgct < 5:156918/149‑1 (MQ=255) cTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCCtgctgc > 3:265547/1‑149 (MQ=255) | ACCTGGCCGGCGAGCACGATCTGCCGCCCGAAACCTTCGTCGAGACCCTGCTGACCACGGCGGGCAACGTCGATGACGTCAAACGCATCCGAGGCGACGCATGAGTACGCCGGTGCTGGAGCTGCGTGGCATTGTCAAGACCTTCGGTGCCACCCGGGCGCTCGACGGCGCCAGCCTGCGGGTGGCGGCGGGCAGCGTGCACGGTCTGGTGGGCGAGAACGGCGCCGGCAAGTCTACGCTGATCAAGGTGCTGGCCGGCATCCACCGCCCGGACGCCGGCAGCCTGCTGC > NC_002947/3142977‑3143266 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |