New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3455551	38 (0.770)	3 (0.060)	3/244	NT	8.5%	coding (340/1953 nt)	aacs	acetoacetyl‑CoA synthetase
	?	NC_002947	= 3455614	28 (0.600)					coding (277/1953 nt)	aacs	acetoacetyl‑CoA synthetase

GCGCCAAGGCTGGTGCAGGCGAGCATGGCCACCAGTGTTTGCCAGGTATTGGGCATGATGGCGGCTACCCGGTCGCCCGGGACGATACCTACCGCCTTGAATGCCGTTTGCAGGCCGGCCACCTGTGCGGCCAGTTCGGCATGGGTGAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3455400‑3455551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacacCTGCTGCGCCGCCGCGACGACCGCCCGGCCGTGGTCGCCGTACGCGAAGACGGCCAGCGCGAAGTGTTCACCC  <  NC_002947/3455614‑3455542                                                                                                                                                                                                                                   GCGCCAAGGCTGGTGCAGGCGAGCATGGCCACCAGTGTTTGCCAGGTATTGGGCATGATGGCGGCTACCCGGTCGCCCGGGACGATACCTACCGCCTTGAATGCCGATTGCAGGCCGGCCACCTGTGCGGCCAGTTCGGCATGGGTGAA                                                                              >  8:137822/1‑149                                                                           GCCCGGGACGATACCTACCGCCTTGAATGCCGGTTGCAGGCCGGCCTCCTGTGCGGCCAGTTCGGCATGGGTGAACACCTGCTGCGCCGCCGCGACGACCGCCCGGCCGTGGTCGCCGTACGCGAAGACGGCCAGCGCGAAGTGTTCAC    <  7:137822/149‑1                                                                                          TACCGCCTTGAATGCCGTTTGCAGGCCGGCCACCTGTGCGGCCAGTTCGGCATGGGTGAACACCTGCTGCGCCGCCGCGACGACCGCCCGGCCGTGGTCGCCGTACGCGAAGACGGCCAGCGCGAAGTGTTCACCC  >  7:284772/1‑136                                                                                          TACCGCCTTGAATGCCGTTTGCAGGCCGGCCACCTGTGCGGCCAGTTCGGCATGGGTGAACACCTGCTGCGCCGCCGCGACGACCGCCCGGCCGTGGTCGCCGTACGCGAAGACGGCCAGCGCGAAGTGTTCACCC  <  8:284772/136‑1                                                                                                                                                                                                                                   GCGCCAAGGCTGGTGCAGGCGAGCATGGCCACCAGTGTTTGCCAGGTATTGGGCATGATGGCGGCTACCCGGTCGCCCGGGACGATACCTACCGCCTTGAATGCCGTTTGCAGGCCGGCCACCTGTGCGGCCAGTTCGGCATGGGTGAACAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3455400‑3455551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacacCTGCTGCGCCGCCGCGACGACCGCCCGGCCGTGGTCGCCGTACGCGAAGACGGCCAGCGCGAAGTGTTCACCC  <  NC_002947/3455614‑3455542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.