New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3652862 =	46 (0.930)	9 (0.190)	6/244	NT	16.7%	coding (748/1320 nt)	PP_3218	NtaA/SnaA/SoxA family monooxygenase
	?	NC_002947	3652899 =	46 (0.980)					coding (785/1320 nt)	PP_3218	NtaA/SnaA/SoxA family monooxygenase

CAGTTCGAAACTGTGGTCGGCCTGATGGTAATGGCGCTCGATCTCACGGGCGTGGGCGTCGTTGTCACCCACGTAGATCTCCGCGCCGGGCAATACCAGCAACTGCTCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3653011‑3652862 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcgACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGCGTTGAAGGAATTCGGGCGCAACTTCGGCT  >  NC_002947/3652899‑3653042                                                                                                                                                                                                                                                                                                        CAGTTCGAAACTGTGGTCGGCCTGATGGTAATGGCGCTCGATCTCACGGGCGTGGGCGTCGTTGTCACCCACGTAGATCTCCGCGCCGGGCAATACCAGCAACTGCTCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGC                                                                                                                                                   <  8:58600/149‑1                                                                                                                GTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGA                                     >  6:206243/1‑148                                                                                                                GTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAG                                                                     >  5:25736/1‑116                                                                                                                GTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAG                                                                     <  6:25736/116‑1                                                                                                                 TCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAAC                                   >  1:120516/1‑149                                                                                                                 TCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAAC                                   >  3:149901/1‑149                                                                                                                         CAGGCGCGCGGCGCGGCGCCTG‑GGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGC                               >  7:931/1‑144                                                                                                                         CAGGCGCGCGGCGCGGCGCCTG‑GGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGC                               <  8:931/144‑1                                                                                                                                 CGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGCGTTGAAGGAATT                   <  2:120516/149‑1                                                                                                                                 CGGCGCGGCGCTTGATGTCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGCGTTGAAGGAATT                   <  4:149901/149‑1                                                                                                                                                  TCGCGACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGCGTTGAAGGAATTCGGGCGCAACTTCGGCT  >  2:30674/1‑149                                                                                                                                                      GACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGC                               <  3:26668/116‑1                                                                                                                                                      GACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGC                               >  4:26668/1‑116                                                                                                                                                                                                                                                                                                        CAGTTCGAAACTGTGGTCGGCCTGATGGTAATGGCGCTCGATCTCACGGGCGTGGGCGTCGTTGTCACCCACGTAGATCTCCGCGCCGGGCAATACCAGCAACTGCTCCGGGTCGCGACCCAGGCGCGCGGCGCGGCGCTTGATGTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3653011‑3652862 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcgACCCGGAGCAGTTGCTGGTATTGCCCGGCGCGGAGATCTACGTGGGTGACAACGACGCCCACGCCCGTGAGATCGAGCGCCATTACCATCAGGCCGACCACAGTTTCGAACTGGCGTTGAAGGAATTCGGGCGCAACTTCGGCT  >  NC_002947/3652899‑3653042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.