New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3680591 =	55 (1.110)	3 (0.060)	3/250	NT	5.5%	coding (345/468 nt)	crtZ	beta‑carotene hydroxylase
	?	NC_002947	3680632 =	50 (1.040)					coding (386/468 nt)	crtZ	beta‑carotene hydroxylase

CAGGTGCCGGGCGTGCCAGGGATGCGTCACGATTGGCTGCGCCTGCTGCGCAATTGCTGCTTCAACACCTTCAGCGGCGGCGCATAGAAGAACCCGAACGACACGCTCCCCGTGCGCCCCTTCACCGCATGGTGCAAGCGGTGCGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3680740‑3680591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCT  >  NC_002947/3680632‑3680739                                                                                                                                                                                                                                                                    CAGGTGCCGGGCGTGCCAGGGATGCGTCACGATTGGCTGCGCCTGCTGCGCAATTGCTGCTTCAACACCTTCAGCGGCGGCGCATAGAAGAACCCGAACGACACGCTCCCCGTGCGCCCCTTCACCGCATGGTGCAAGCGGTGCGCGCG                                                                                                               <  3:231474/149‑1                                                                                                              CCGTGCGCCCCTTCACCGCATGGTGCAAGCGGTGCGCGCGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCT  >  4:283606/1‑149                                                                                                                      CCCTTCACCGCATGGTGCAAGCGGTGCGCGCGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCA                                                          >  7:187549/1‑85                                                                                                                      CCCTTCACCGCATGGTGCAAGCGGTGCGCGCGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCA                                                          <  8:187549/85‑1                                                                                                                                                                                                                                                                    CAGGTGCCGGGCGTGCCAGGGATGCGTCACGATTGGCTGCGCCTGCTGCGCAATTGCTGCTTCAACACCTTCAGCGGCGGCGCATAGAAGAACCCGAACGACACGCTCCCCGTGCGCCCCTTCACCGCATGGTGCAAGCGGTGCGCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3680740‑3680591 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCT  >  NC_002947/3680632‑3680739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.