| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4117877 = | 34 (0.690) | 4 (0.090) | 4/238 | NT | 12.2% | coding (567/2256 nt) | PP_3622 | isoquinoline 1‑oxidoreductase subunit beta |
| ? | NC_002947 | 4117923 = | 26 (0.570) | coding (613/2256 nt) | PP_3622 | isoquinoline 1‑oxidoreductase subunit beta | |||||
CCTTGATGTCGATGCAGTACTGGGCCTTGCCGGTGGACTTGTCGTAGGCATCCAGGCGGCGTACGGGCTTTCCAATCCAGCGAAACTGGCTGGGGTCGCGCAGCTTGACGCTGGCCGGGTCGGGCACCGGCAGGTCCATGGCGCGACCGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4118031‑4117877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccagcGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATCGACATCAAG > NC_002947/4117923‑4118030 CCTTGATGTCGATGCAGTACTGGGCCTTGCCGGTGGACTTGTCGTAGGCATCCAGGCGGCGTACGGGCTTTCCAATCCAGCGAAACTGGCTGGGGTCGCGCAGCTTGACGCTGGCCGGGTCGGGCACCGGCAGGTCCATGGCGCGACCG > 1:155907/1‑149CCTTGATGTCGATGCAGTACTGGGCCTTGCCGGTGGACTTGTCGTAGGCATCCAGGCGGCGTACGGGCTTTCCAATCCAGCGAAACTGGCTGGGGTCGCGCAGCTTGACGCTGGCCGGGTCGGGCACCGGCAGGTCCATGGCGCGACCG > 4:137647/1‑149 ATGTCGATGCAGTACTGGGCCTTGCCGGTGGACTTGTCGTAGGCATCCAGGCGGCGTACGGGCTTTCCAATCCAGCGAAACTGGCTGGGGTCGCGCAGCTTGACGCTGGCCGGGTCGGGCACCGGCAGGTCCATGGCGCGACCGGCCA < 3:137647/148‑1 CTGGCCGGGTCGGGCACCGGCAGGTCCATGGCGCGACCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATCG < 3:185917/145‑1 CTGGCCGGGTCGGGCACCGGCAGGTCCATGGCGCGACCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATCG > 4:185917/1‑145 TGGCCGGGTCGGGCACCGGCAGGTCCATGGCGCGACCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATCGACAT > 2:95816/1‑148 CCGGGTCGGGCACCGGCAGGTCCATGGCGCGACCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATCGACATCAAG < 1:95816/149‑1 CCTTGATGTCGATGCAGTACTGGGCCTTGCCGGTGGACTTGTCGTAGGCATCCAGGCGGCGTACGGGCTTTCCAATCCAGCGAAACTGGCTGGGGTCGCGCAGCTTGACGCTGGCCGGGTCGGGCACCGGCAGGTCCATGGCGCGACCGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4118031‑4117877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggccagcGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATCGACATCAAG > NC_002947/4117923‑4118030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |