New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4117877 =	34 (0.690)	4 (0.090)	4/238	NT	12.2%	coding (567/2256 nt)	PP_3622	isoquinoline 1‑oxidoreductase subunit beta
	?	NC_002947	4117923 =	26 (0.570)					coding (613/2256 nt)	PP_3622	isoquinoline 1‑oxidoreductase subunit beta

ACCCCACCATGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATC  >  NC_002947/4117729‑4118021                                                                                                                                                     |                                                                                                                                                 aCCCCACCATGCGCCGTCTGGGCGCGCTCGCCCCGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAg                                                                                                                                                  >  1:196101/1‑149 (MQ=255)         aTGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAAGACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTATTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCgg                                                                                                                                          <  2:6257/149‑1 (MQ=255)             gcCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACCCCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTcgc                                                                                                                                      >  6:290397/1‑149 (MQ=255)                gTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCgcgc                                                                                                                                    >  5:285458/1‑148 (MQ=255)                gTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCgcgc                                                                                                                                    >  4:52866/1‑148 (MQ=255)                            tCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATgg                                                                                                                               >  4:242459/1‑141 (MQ=255)                            tCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATgg                                                                                                                               <  3:242459/141‑1 (MQ=255)                              gCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCg                                                                                                                                           <  6:320350/127‑1 (MQ=255)                              gCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCg                                                                                                                                           >  5:320350/1‑127 (MQ=255)                                       aTGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGAccc                                                                                                            >  5:132548/1‑149 (MQ=255)                                         cttgatgtcgatgcagtactgggccttgccggtggacttgtcgtaggcatccaggcggcgtacgggctttccaatccagcgaaactggctggggtcgcgcagcttgacGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCgg                                                                                                          <  1:95816‑M1/41‑1 (MQ=255)                                          ctgctgcAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCgg                                                                                                          <  6:132548/148‑1 (MQ=255)                                             atgtcgatgcagtactgggccttgccggtggacttgtcgtaggcatccaggcggcgtacgggctttccaatccagcgaaactggctggggtcgcgcagcttgacGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCa                                                                                                       >  2:95816‑M1/105‑148 (MQ=255)                                                 cgatgcagtactgggccttgccggtggacttgtcgtaggcatccaggcggcgtacgggctttccaatccagcgaaactggctggggtcgcgcagcttgacGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAg                                                                                                      <  3:185917‑M1/45‑1 (MQ=255)                                                 cgatgcagtactgggccttgccggtggacttgtcgtaggcatccaggcggcgtacgggctttccaatccagcgaaactggctggggtcgcgcagcttgacGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAg                                                                                                      >  4:185917‑M1/101‑145 (MQ=255)                                                 aGGCGGGCGCCGAACCCCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGtg                                                                                                  <  2:196101/149‑2 (MQ=255)                                                           cGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTgcgc                                                                                         >  1:104836/1‑148 (MQ=255)                                                                       tgtACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGt                                                                            >  2:8397/1‑149 (MQ=255)                                                                              gTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTg                                                                     >  2:155907/1‑149 (MQ=255)                                                                              gTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTAGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTg                                                                     >  7:86387/1‑149 (MQ=255)                                                                                 gATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGAt                                                                  <  5:290397/149‑1 (MQ=255)                                                                                  aTGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGAtt                                                                 <  1:8397/149‑1 (MQ=255)                                                                                    gAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTg                                                                >  1:142690/1‑148 (MQ=255)                                                                                              ccACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCTGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTa                                                     >  3:213378/1‑149 (MQ=255)                                                                                              ccACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGccc                                                        <  2:104836/146‑1 (MQ=255)                                                                                              ccACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTa                                                     >  6:259605/1‑149 (MQ=255)                                                                                                     gggTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACgccgcc                                              <  5:259605/149‑1 (MQ=255)                                                                                                          aCGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCTGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGAt                                         <  4:213378/149‑1 (MQ=255)                                                                                                                taCATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGAGCGACCCAAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTAc                                   >  2:30484/1‑149 (MQ=255)                                                                                                                   aTACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGAc                                <  3:52866/149‑1 (MQ=255)                                                                                                                     aCCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGAc                                >  8:144920/1‑147 (MQ=255)                                                                                                                     aCCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGAc                                >  1:203899/1‑147 (MQ=255)                                                                                                                       cACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGt                            >  3:77696/1‑149 (MQ=255)                                                                                                                          gACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGCCCAGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCa                         >  6:226111/1‑149 (MQ=255)                                                                                                                          gACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCa                         >  3:207501/1‑149 (MQ=255)                                                                                                                           aCCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCAc                        <  8:86387/149‑1 (MQ=255)                                                                                                                               gACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCATCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGc                    <  6:285458/149‑1 (MQ=255)                                                                                                                               gACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCgg                     >  1:271027/1‑148 (MQ=255)                                                                                                                                       gTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCa            <  2:203899/149‑1 (MQ=255)                                                                                                                                                 gTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATc  <  7:144920/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                 ACCCCACCATGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATC  >  NC_002947/4117729‑4118021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.