New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4408579	48 (0.970)	3 (0.060)	3/246	NT	5.6%	coding (150/297 nt)	ybcO	hypothetical protein
	?	NC_002947	= 4408605	55 (1.160)					coding (124/297 nt)	ybcO	hypothetical protein

CTACTCATGCAACCAGCACCCCCTCGCGAATCAAAATGGACTGGGTGCGCATGACGCCCTCGGCGTGGTACTGCCGGGCTGTGTCACGGTCTACGGACTGGCTGCGGCCGTCGCAGGCATCATGGCAGGCGCTGCAGCACC‑AGGCGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4408428‑4408579 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcGGCGGCGGCAAGAAACCGCACGACATGCAGGGCGCCTGGTG  <  NC_002947/4408605‑4408565                                                                                                                                                                                                    CTACTCATGCAACCAGCACCCCCTCGCGAATCAAAATGGACTGGGTGCGCATGACGCCCTCGGCGTGGTACTGCCGGGCTGTGTCACGGTCTACGGACTGGCTGCGGCCGTCGCAGGCATCATGGCAGGCGCTGCAGCACC‑AGGCGCCC                                              >  5:208711/1‑149                                   AATGGACTGGGTGCGCATGACGCCCTCGGCGTGGTACTGCCGGGCTGTGTCACGGTCTACGGACTGGCTGCGGCCGTCGCAGGCATCATGGCAGGCGCTGCAGCACC‑AGGCGCCCTGCGGCGGCGGCAAGAAACCGCACGACATGCAGG            <  6:257282/149‑1                                                                                                             CGTCGCAGGCATCATGGCAGGCGCTGCAGCACCTAGGCGCCCTGCGGCGGCGGCAAGAAACCGCACGACATGCAGGGCGCCTGGTG  >  1:42910/1‑86                                                                                                             CGTCGCAGGCATCATGGCAGGCGCTGCAGCACC‑AGGCGCCCTGCGGCGGCGGCAAGAAACCGCACGACATGCAGGGCGCCTGGTG  <  2:42910/85‑1                                                                                                                                                                                                    CTACTCATGCAACCAGCACCCCCTCGCGAATCAAAATGGACTGGGTGCGCATGACGCCCTCGGCGTGGTACTGCCGGGCTGTGTCACGGTCTACGGACTGGCTGCGGCCGTCGCAGGCATCATGGCAGGCGCTGCAGCACC‑AGGCGCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4408428‑4408579 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcGGCGGCGGCAAGAAACCGCACGACATGCAGGGCGCCTGGTG  <  NC_002947/4408605‑4408565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.