New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4507290 =	50 (1.010)	4 (0.080)	3/246	NT	7.7%	intergenic (+8/+99)	gqr/cysG	glutathionyl‑hydroquinone reductase/multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
	?	NC_002947	4507382 =	48 (1.010)					intergenic (+100/+7)	gqr/cysG	glutathionyl‑hydroquinone reductase/multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase

GGCCGCTTTGCGGCCCATCGCATATGCCCCAGGCATTGCAAGGTCCTTGTAAGAGCGGCCTTGTGTTGCGATGGGCTGCAAAGCAGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4507379‑4507290 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccAACGATTTCAGCTGTTCTGCGAACCTTCGAACCAGGCCAGCTTGTCACGCAACTGCACCACTTCCCCCACAATCACCAGGGTCGGCGCATGCACCTCATGCTGGGCCACCAGGTCTGGCAAGTCCGCCAAGGTGCCGGTGAACACGC  >  NC_002947/4507382‑4507528                                                                                                                                                                                                                                               GGCCGCTTTGCGGCCCATCGCATATGCCCCAGGCATTGCAAGGTCCTTGTAAGAGCGGCCTTGTGTTGCGATGGGCTGCAAAGCAGCCCCAACGATTTCAGCTGTTCTGCGAACCTTCGAACCAGGCCAGCTTGTCACGCAACTGCAC                                                                                           >  5:10074/1‑148            GGCCCATCGCATATGCCCCAGGCATTGCAAGGTCCTTGTAAGAGCGGCCTTGTGTTGCGATGGGCTGCAAAGCAGCCCCAACGATTTCAGCTGTTCTGCGAACCTTCGAACCAGGCCAGCTTGTCAAGCCAATGAACAACTTCCCACA                                                                                >  6:166998/1‑148                                GGCATTGCAAGTTCCTTTTAAGAGCGGCCTTGTGTTTCGATGGGCTGCAAAGCAGCCCCAACGATTTCATCTGTTCTGCGAACCTTCGAACCAGGCCAGATTGTCACGCAACTTCACCACTTCCCCCACAATCACCAGGGTCGGCGCAT                                                           <  5:166998/149‑1                                GGCATTGCAAGGTCCTTGTAAGAGCGGCCTTGTGTTGCGATGGGCTGCAAAGCAGCCCCAACGATTTCAGCTGTTCTGCGAACCTTCGAACCAGGCCAGCTTGTCACGCAACTGCACCACTTCCCCCACAATCACCAGGGTCGGCGCAT                                                           <  6:10074/149‑1                                                                                       CCCCAACGATTTCAGCTGTTCTGCGAACCTTCGAACCAGGCCAGCTTGTCACGCAACTGCACCACTTCCCCCACAATCACCAGGGTCGGCGCATGCACCTCATGCTGGGCCACCAGGTCTGGCAAGTCCGCCTAGGTGCCGGTGAACAC    >  7:98532/1‑149                                                                                         CCAACTATTTCAGCTGTTCTGCGAACCTTCGAACCAGGCCAGCTTGTCACGCAACTGCACCACTTCCCCCACAATCACCAGGGTCGGCGCATGCACCTCATGCTGGGCCACCAGGTCTGGCAAGTCCGCCAAGGTGCCGGTGAACACGC  <  5:319883/149‑1                                                                                         CCAACGATTTCAGCTGTTCTGCGAACCTTCGAACCAGGCCAGCTTGTCACGCAACTGCACCACTTCCCCCACAATCACCAGGGTCGGCGCATGCACCTCATGCTGGGCCACCAGGTCTGGCAAGTCCGCCAAGGTGCCGGTGAACACGC  >  1:254909/1‑149                                                                                         CCAACGATTTCAGCTGTTCTGCGAACCTTCGAACCAGGCCAGCTTGTCACGCAACTGCACCACTTCCCCCACAATCACCAGGGTCGGCGCATGCACCTCATGCTGGGCCACCAGGTCTGGCAAGTCCGCCAAGGTGCCGGTGAACACGC  <  8:79024/149‑1                                                                                                                                                                                                                                               GGCCGCTTTGCGGCCCATCGCATATGCCCCAGGCATTGCAAGGTCCTTGTAAGAGCGGCCTTGTGTTGCGATGGGCTGCAAAGCAGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4507379‑4507290 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccAACGATTTCAGCTGTTCTGCGAACCTTCGAACCAGGCCAGCTTGTCACGCAACTGCACCACTTCCCCCACAATCACCAGGGTCGGCGCATGCACCTCATGCTGGGCCACCAGGTCTGGCAAGTCCGCCAAGGTGCCGGTGAACACGC  >  NC_002947/4507382‑4507528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.