| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4520290 = | 36 (0.730) | 4 (0.090) | 4/244 | NT | 9.7% | coding (148/267 nt) | cspD | DNA replication inhibitor |
| ? | NC_002947 | 4520332 = | 40 (0.850) | coding (190/267 nt) | cspD | DNA replication inhibitor | |||||
CCGATTTTTTTGTCTATCGGCACAGCGCAGGCAGTCAGGCTTTTGCAGTTTCGCTTTGCGGCTCGCCCAAGGCTCTGGCAGCCTCTGCCGCAGCGGCCGCGGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4520443‑4520290‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgaaATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGTTTTCTGTTGC > NC_002947/4520332‑4520479 CCGATTTTTTTGTCTATCGGCACAGCGCAGGCAGTCAGGCTTTTGCAGTTTCGCTTTGCGGCTCGCCCAAGGCTCTGGCAGCCTCTGCCGCAGCGGCCGCGGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATG < 4:257334/149‑1CCGATTTTTTTGTCTATCGGCACAGCGCAGGCAGTCAGGCTTTTGCAGTTTCGCTTTGCGGCTCGCCCAAGGCTCTGGCAGCCTCTGCCGCAGCGGCCGCGGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATG < 7:180660/149‑1 CGATTTTTTTGTCTATCGGCACAGCGCAGGCAGTCAGGCTTTTGCAGTTTCGCTTTGCGGCTCGCCCAAGGCTCTGGCAGCCTCTGCCGCAGCGGCCGCGGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGT > 6:284250/1‑149 GATTTTTTTGTCTATCGGCACAGCGCAGGCAGTCAGGCTTTTGCAGTTTCGCTTTGCGGCTCGCCCAAGGCTCTGGCAGCCTCTGCCGCAGCGGCCGCGGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGTT > 4:170822/1‑149 ATTTTTTTGTCTATCGGCACAGCGCAGGCAGTCAGGCTTTTGCAGTTTCGCTTTGCGGCTCGCCCAAGGCTCTGGCAGCCTCTGCCGCAGCGGCCGCGGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGTT > 2:249070/1‑148 TTTTTTTGTCTATCGGCACAGCGCAGGCAGTCAGGCTTTTGCAGTTTCGCTTTGCGGCTCGCCCAAGGCTCTGGCAGCCTCTGCCGCAGCGGCCGCGGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGTTG < 2:134450/148‑1 TTTTTTGTCTATCGGCACAGCGCAGGCAGTCAGGCTTTTGCAGTTTAGCTTTGCGGCTCGCCCAAGGCTCTGGCAGCCTCTGCCGCAGCGGCCGCGGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGTTGAA > 8:213269/1‑149 AGTCAGGCTTTTGCAGTTTCGCTTTGCGGCTCGCCCAAGGCTCTGGCAGCCTCTGCCGCAGCGGCCGCGGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGTTGAA < 1:272085/122‑1 AGTCAGGCTTTTGCAGTTTCGCTTTGCGGCTCGCCCAAGGCTCTGGCAGCCTCTGCCGCAGCGGCCGCGGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGTTGAA > 2:272085/1‑122 ggttTCTTTTATTTCATCGGCGTGCATGCCTTTGGGGCCTTGGACTTTTTTTAAATAAATGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTG < 4:93048/142‑1 GGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTG > 3:93048/1‑146 TTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACCGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAA > 2:67449/1‑148 TCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGTTGAAATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACCGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAA < 1:67449/148‑1 GAAATCAAAGATGCCGCGGCCGCGGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAATGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGTTTTCTGT < 6:167883/148‑1 AATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGTTTTCTGTTGC < 3:199822/149‑1 CCGATTTTTTTGTCTATCGGCACAGCGCAGGCAGTCAGGCTTTTGCAGTTTCGCTTTGCGGCTCGCCCAAGGCTCTGGCAGCCTCTGCCGCAGCGGCCGCGGCATCTTTGATTTCAACGGCGTGCAAGCCCTTGGGGCCCTGGACGATGTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4520443‑4520290‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgaaATCAAAGATGCCGCGGCCGCTGCGGCAGAGGCTGCCAGAGCCTTGGGCGAGCCGCAAAGCGAAACTGCAAAAGCCTGACTGCCTGCGCTGTGCCGATAGACAAAAAAATCGGCCGCTTCTTTAAAAGAAGCGACCGGTTTTCTGTTGC > NC_002947/4520332‑4520479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |